PYDC2
Genomic Map
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| Gene Symbol: PYDC2 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001083308.1 | NP_001076777.1 | 1 | 221 | 88 | |
| GenBank mRNA | AY858112.1 | - | 1 | 221 | 88 | |
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Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0300009869.hg.1This assay targets the same location as HTA transcript cluster(s) TC03001053.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Recommended Assay
Homo sapiens
Both primers and probe map within a single exon
|
Gene Ontology Categories:
Function(s)
Process(es)
inflammatory response
negative regulation of tumor necrosis factor-mediated signaling pathway
negative regulation of NF-kappaB transcription factor activity
negative regulation of NF-kappaB import into nucleus
innate immune response
negative regulation of interleukin-1 beta secretion
negative regulation of inflammatory response
negative regulation of NLRP3 inflammasome complex assembly
protein binding
inflammatory response
negative regulation of tumor necrosis factor-mediated signaling pathway
negative regulation of NF-kappaB transcription factor activity
negative regulation of NF-kappaB import into nucleus
innate immune response
negative regulation of interleukin-1 beta secretion
negative regulation of inflammatory response
negative regulation of NLRP3 inflammasome complex assembly
protein binding
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858332 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998516 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998538 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998509 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998527 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858273 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858329 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858272 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998547 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998526 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858270 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998512 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15522597 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858302 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858328 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15522598 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998560 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858304 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998529 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15522595 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998553 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998554 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998502 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998521 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998520 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858312 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858330 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998505 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998508 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998555 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998514 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858313 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998501 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998550 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998535 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858284 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998542 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998533 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858291 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998519 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998524 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998523 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858286 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858306 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998513 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22998549 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02858333 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3307568 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_1523 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_1522 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 60884 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3307568 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3307568 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998529 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858286 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998533 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998516 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858304 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998505 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998543 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858291 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998501 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858284 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998535 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998522 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998509 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15522600 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998519 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858313 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998524 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998503 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998527 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998507 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998526 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858310 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858273 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858306 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15522598 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998536 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998520 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998508 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998514 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998542 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998502 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998513 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858302 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998514 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998509 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858306 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998529 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858286 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858273 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998543 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998508 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998536 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998519 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858284 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998513 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858313 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858291 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998524 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15522600 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858302 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998503 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998502 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998505 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998522 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998507 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998520 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858310 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998501 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998533 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998526 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998535 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15522598 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998542 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998516 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02858304 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22998527 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858331 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858315 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858270 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15522599 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858282 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858273 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858286 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858292 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858303 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858329 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858310 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858294 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858280 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858284 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15522595 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858326 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858334 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858297 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858322 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858306 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858276 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858324 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858335 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858289 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858308 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858300 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858312 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858296 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02858319 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NM_001083308_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8084833 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 8084832 | - | - |
| Affymetrix Human Genome U219 Array | 11738971_x_at | - | - |
| Affymetrix Human Genome U219 Array | 11738970_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11738970_at | - | - |
| Affymetrix Human Genome U219 Array | 11738971_PM_x_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR03018581.hg.1 | TC03001053.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR03018581.hg.1 | ENST00000518817.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR03018581.hg.1 | NM_001083308.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0300009869.hg.1 | ENST00000518817.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0300009869.hg.1 | NM_001083308.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0300171817.hg.1 | ENST00000518817.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300171817.hg.1 | NM_001083308.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0300171817.hg.1 | ENST00000518817.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0300171817.hg.1 | NM_001083308.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0300171817.hg.1 | TC0300009869.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0300009869.hg.1 | ENST00000518817.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0300009869.hg.1 | NM_001083308.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A023714 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A023714 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_1672325 | NM_001083308.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_1672325 | AY858112.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1672325 | NM_001083308.1 | human_transcriptome |
| Illumina HumanWG-6 v2.0 expression beadchip | ILMN_1672325 | AY858112.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_1672325 | NM_001083308.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_1672325 | AY858112.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1672325 | NM_001083308.1 | human_transcriptome |
| Illumina human-6 v2.0 expression beadchip | ILMN_1672325 | AY858112.1 | human_transcriptome |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1672325 | NM_001083308.1 | human_transcriptome |
| Illumina HumanWG-6 v3.0 expression beadchip | ILMN_1672325 | AY858112.1 | human_transcriptome |
| Illumina HumanHT-12 V3.0 expression beadchip | ILMN_1672325 | NM_001083308.1 | human_transcriptome |
| Illumina HumanHT-12 V3.0 expression beadchip | ILMN_1672325 | AY858112.1 | human_transcriptome |
| Illumina HumanWG-6_V2_0_R2 | ILMN_1672325 | NM_001083308.1 | human_transcriptome |
| Illumina HumanWG-6_V2_0_R2 | ILMN_1672325 | AY858112.1 | human_transcriptome |
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