Name: [Hs03296495_g1] [HOTTIP]
Creator: Thermo Fisher Scientific
Keywords: [HOTTIP] Assay, [HOXA distal transcript antisense RNA] Assay

Assay Details

Gene Symbol: HOTTIP
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_037843.3		1 - 2	101		71
GenBank mRNA	AK093987.1	-	1 - 2	85		71
GenBank mRNA	GU724873.1	-	1 - 2	101		71

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA858617.1	-	1 - 2	66		Chr. 7 - 27200456 - 27201153 [+] on Build GRCh38	71
GenBankmRNA	DB250371.1	-	1 - 2	85		Chr. 7 - 27200437 - 27201097 [+] on Build GRCh38	71

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	homeobox A13	HOXA13	HOX1, HOX1J	-171.0	Anti-sense	Chr. 7 - 27196880 - 27200106 on NCBI Build GRCh38
Downstream	EVX1 antisense RNA	EVX1-AS	EVX1-AS1	38.6kb	Anti-sense	Chr. 7 - 27241429 - 27247229 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700007007.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07000170.hg.1

Set Membership:

Amplicon length between 71 and 85

Detect Genomic DNA

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07002674.hg.1	TC07000170.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07002674.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07002674.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07002674.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07002675.hg.1	TC07000170.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07002675.hg.1	ENST00000421733.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07002675.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07002675.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07002675.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000421733.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000421733.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000614457.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000614457.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000614457.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000616633.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000616633.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000618195.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000619957.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000619957.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	ENST00000620415.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	ENST00000421733.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	ENST00000614457.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	ENST00000421733.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	ENST00000614457.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700148621.hg.1	TC0700007007.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000421733.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000421733.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000614457.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000614457.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000614457.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000616633.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000616633.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000618195.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000619957.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000619957.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	ENST00000620415.1	Ensembl
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	TC0700007007.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	ENST00000614457.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	ENST00000620415.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	ENST00000472494.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	ENST00000521028.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	ENST00000605136.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	ENST00000614457.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	ENST00000620415.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	NR_037843.3	Refseq
Affymetrix Human Clariom D Assay	PSR0700148618.hg.1	TC0700007007.hg.1	Clariom D TC

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Genomic Map