Hs03296616_m1

• Gene Symbol: HOXC13-AS
• Gene Name: HOXC13 antisense RNA
• Gene Aliases: HOXC-AS5
• Chromosome Location: Chr.12: 53935328 - 53939643 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: HOXC13-AS
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_047507.1		2 - 3	367		79
GenBank mRNA	CN364530.1	-	2 - 3	371		79

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	chondrogenesis-associated transcript	CISTR	CISTR-ACT, CISTRACT, re52431	-179.0kb	Sense	Chr. 12 - 53750447 - 53757034 on NCBI Build GRCh38
Downstream	homeobox C13	HOXC13	ECTD9, HOX3, HOX3G	1.4kb	Anti-sense	Chr. 12 - 53938792 - 53946544 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200010818.hg.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200010818.hg.1	ENST00000512916.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010818.hg.1	ENST00000512916.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010818.hg.1	ENST00000512916.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200010818.hg.1	NR_047507.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200010818.hg.1	NR_047507.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1200010818.hg.1	NR_047507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182945.hg.1	ENST00000512916.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182945.hg.1	NR_047507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182945.hg.1	ENST00000512916.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182945.hg.1	NR_047507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182945.hg.1	TC1200010818.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1200010818.hg.1	ENST00000512916.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200010818.hg.1	ENST00000512916.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200010818.hg.1	ENST00000512916.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200010818.hg.1	NR_047507.1	Refseq
Affymetrix Human Clariom D Assay	TC1200010818.hg.1	NR_047507.1	Refseq
Affymetrix Human Clariom D Assay	TC1200010818.hg.1	NR_047507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182943.hg.1	ENST00000512916.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182943.hg.1	NR_047507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182943.hg.1	ENST00000512916.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182943.hg.1	NR_047507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182943.hg.1	TC1200010818.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1200182944.hg.1	ENST00000512916.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182944.hg.1	NR_047507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182944.hg.1	ENST00000512916.2	Ensembl
Affymetrix Human Clariom D Assay	PSR1200182944.hg.1	NR_047507.1	Refseq
Affymetrix Human Clariom D Assay	PSR1200182944.hg.1	TC1200010818.hg.1	Clariom D TC