Name: [Hs03297862_s1] [SNORA66]
Creator: Thermo Fisher Scientific
Keywords: [SNORA66] Assay, [small nucleolar RNA, H/ACA box 66] Assay

Assay Details

Gene Symbol: SNORA66
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_002444.2		1	65		102
GenBank mRNA	Y11160.1	-	1	65		102

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DA519999.1	-	1		Chr. 1 - 92840557 - 92841124 [-] on Build GRCh38	102
GenBankmRNA	Z39353.1	-		125	Chr. 5 - 19546118 - 19546133 [-] on Build GRCh38	102
GenBankmRNA	R49575.1	-		134	Chr. - - [-] on Build	102
GenBankmRNA	H17614.1	-	1	130	Chr. 1 - 92840654 - 92841025 [+] on Build GRCh38	102

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	family with sequence similarity 69 member A	FAM69A			Anti-sense	Chr. 1 - 92832729 - 92961522 on NCBI Build GRCh38
Downstream	metal response element binding transcription factor 2	MTF2	M96, PCL2, TDRD19A, dJ976O13.2	238.4kb	Sense	Chr. 1 - 93079219 - 93139081 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100009046.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01000854.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_3779	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_3778	-	-
SurePrint G3 Human GE Microarray G4851A	ERCC-00148_99	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409064	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409067	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409075	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409058	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00379365	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409076	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409055	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409061	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409068	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409065	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409072	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409062	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409057	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409074	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409071	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409065	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409061	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409074	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409057	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409075	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409055	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409058	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409072	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409071	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409062	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409064	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409067	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409076	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20409068	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00379365	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379340	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379336	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379381	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379370	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379362	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379333	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379373	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379324	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379367	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379342	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379344	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379345	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379379	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379320	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379365	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379326	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379327	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379323	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379361	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379353	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379337	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379374	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379354	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379330	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379346	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379368	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379375	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379383	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379359	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379322	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379355	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P00379364	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	NR_002444_at	-	-
Affymetrix Human Gene 1.0 ST Array	7903018	-	-
Affymetrix Human Gene 1.1 ST Array	7903010	-	-
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000383953.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000384792.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000497519.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000497519.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000497519.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000497519.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000497519.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	ENST00000497519.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NR_000006.8	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009046.hg.1	NR_002444.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01013601.hg.1	TC01000854.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01013601.hg.1	ENST00000384792.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01013601.hg.1	NR_002444.2	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000315741.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000370321.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000383953.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000384792.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000461952.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000470843.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000497519.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000497519.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000497519.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000497519.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000497519.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	ENST00000497519.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NM_000969.4	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NR_000006.8	Refseq
Affymetrix Human Clariom D Assay	TC0100009046.hg.1	NR_002444.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100164510.hg.1	ENST00000384792.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100164510.hg.1	NR_002444.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100164510.hg.1	ENST00000384792.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100164510.hg.1	NR_002444.2	Refseq
Affymetrix Human Clariom D Assay	PSR0100164510.hg.1	TC0100009046.hg.1	Clariom D TC
Human Genome U133 Plus 2.0 Array	210035_s_at	-	-
Human Genome U133 Plus 2.0 Array	210035_PM_s_at	-	-
Human Genome U133A 2.0 Array	210035_PM_s_at	-	-
Human Genome U133A 2.0 Array	210035_s_at	-	-
Human Genome U133 Set	210035_PM_s_at	-	-
Human Genome U133 Set	210035_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1689616	Y11160.1	human_transcriptome
Illumina HumanWG-6 v2.0 expression beadchip	ILMN_1689616	Y11160.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_1689616	Y11160.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_1689616	Y11160.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_1689616	Y11160.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1689616	Y11160.1	human_transcriptome
Illumina Sentrix Human-6 v2 Expression BeadChip	1850646	-	-
Illumina HumanRef-6 v2.0 expression beadchip	ILMN_28289	-	-
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1689616	Y11160.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1689616	Y11160.1	human_transcriptome
Illumina HumanWG-6_V2_0_R2	ILMN_1689616	Y11160.1	human_transcriptome

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Catalog #	4426961
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Genomic Map