Name: [Hs03297950_m1] [RFPL3S]
Creator: Thermo Fisher Scientific
Keywords: [RFPL3S] Assay, [RFPL3 antisense] Assay

Assay Details

Gene Symbol: RFPL3S
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_002596.2		2 - 3	250		95
GenBank mRNA	BC042824.1	-	2 - 3	176		95
	BC066983.1	-	2 - 3	176		95
	BC090926.1	-	2 - 3	176		95

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	HY028065.1	-	2 - 3	177	Chr. 22 - 32360641 - 32371002 [-] on Build GRCh38	95
GenBankmRNA	BI828584.1	-	2 - 3	250	Chr. 22 - 32360538 - 32371076 [-] on Build GRCh38	95
GenBankmRNA	HY015298.1	-	2 - 3	181	Chr. 22 - 32360592 - 32371004 [-] on Build GRCh38	95
GenBankmRNA	BU584154.1	-	2 - 3	103	Chr. 22 - 32363015 - 32370929 [-] on Build GRCh38	95
GenBankmRNA	DB442643.1	-	1 - 2	74	Chr. 22 - 32360564 - 32368569 [-] on Build GRCh38	95
GenBankmRNA	CD359353.1	-	2 - 3	162	Chr. 22 - 32360312 - 32370990 [-] on Build GRCh38	95
GenBankmRNA	DB457022.1	-	2 - 3	177	Chr. 22 - 32360628 - 32371003 [-] on Build GRCh38	95
GenBankmRNA	HY033409.1	-	2 - 3	177	Chr. 22 - 32360680 - 32371002 [-] on Build GRCh38	95
GenBankmRNA	DB459325.1	-	2 - 3	173	Chr. 22 - 32360647 - 32370999 [-] on Build GRCh38	95
GenBankmRNA	DB457839.1	-	2 - 3	173	Chr. 22 - 32360630 - 32370999 [-] on Build GRCh38	95
GenBankmRNA	DB447067.1	-	2 - 3	173	Chr. 22 - 32360698 - 32370999 [-] on Build GRCh38	96
GenBankmRNA	BI461189.1	-	2 - 3	181	Chr. 22 - 32360588 - 32371002 [-] on Build GRCh38	95
GenBankmRNA	HY026769.1	-	2 - 3	239	Chr. 22 - 32360701 - 32371064 [-] on Build GRCh38	95
GenBankmRNA	HY009642.1	-	2 - 3	177	Chr. 22 - 32360581 - 32371002 [-] on Build GRCh38	95
GenBankmRNA	HY049960.1	-	2 - 3	177	Chr. 22 - 32360692 - 32371002 [-] on Build GRCh38	95
GenBankmRNA	HY017315.1	-	2 - 3	177	Chr. 22 - 32360581 - 32371002 [-] on Build GRCh38	95
GenBankmRNA	HY054907.1	-	2 - 3	177	Chr. 22 - 32360703 - 32371002 [-] on Build GRCh38	95
GenBankmRNA	DB455123.1	-	2 - 3	177	Chr. 22 - 32360647 - 32371003 [-] on Build GRCh38	95
GenBankmRNA	BG771936.1	-	2 - 3	181	Chr. 22 - 32360389 - 32371002 [-] on Build GRCh38	95
GenBankmRNA	HY055002.1	-	2 - 3	176	Chr. 22 - 32360704 - 32370999 [-] on Build GRCh38	95
GenBankmRNA	BG720986.1	-	2 - 3	181	Chr. 22 - 32360230 - 32371002 [-] on Build GRCh38	95
GenBankmRNA	DB449158.1	-	2 - 3	245	Chr. 22 - 32360775 - 32371070 [-] on Build GRCh38	95
GenBankmRNA	HY011074.1	-	2 - 3	177	Chr. 22 - 32360626 - 32371002 [-] on Build GRCh38	95
GenBankmRNA	HY027331.1	-	2 - 3	177	Chr. 22 - 32360615 - 32371002 [-] on Build GRCh38	95
GenBankmRNA	CN411545.1	-	5 - 6	380	Chr. 22 - 32362974 - 32382052 [-] on Build GRCh38	95
GenBankmRNA	BU584156.1	-	2 - 3	103	Chr. 22 - 32362977 - 32370929 [-] on Build GRCh38	95
GenBankmRNA	BU569141.1	-	2 - 3	179	Chr. 22 - 32360388 - 32371002 [-] on Build GRCh38	95
GenBankmRNA	HY007602.1	-	2 - 3	222	Chr. 22 - 32360684 - 32371047 [-] on Build GRCh38	95
GenBankmRNA	BG723497.1	-	2 - 3	181	Chr. 22 - 32360422 - 32371002 [-] on Build GRCh38	95

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	ret finger protein like 3	RFPL3		-6.5kb	Anti-sense	Chr. 22 - 32354885 - 32361161 on NCBI Build GRCh38
Downstream	uncharacterized LOC339666	LOC339666		8.1kb	Anti-sense	Chr. 22 - 32376664 - 32384343 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2200008513.hg.1
This assay targets the same location as HTA transcript cluster(s) TC22000681.hg.1

Set Membership:

Amplicon length between 86 and 100

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR22012022.hg.1	ENST00000400234.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22012022.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22012022.hg.1	TC22000681.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22012020.hg.1	ENST00000382084.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22012020.hg.1	ENST00000382086.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22012020.hg.1	ENST00000400234.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22012020.hg.1	NR_001450.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22012020.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22012020.hg.1	TC22000681.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR22012019.hg.1	ENST00000382084.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22012019.hg.1	ENST00000382086.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22012019.hg.1	ENST00000400234.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22012019.hg.1	NR_001450.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22012019.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22012019.hg.1	TC22000681.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000461833.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000461833.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000461833.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	ENST00000621921.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000461833.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000461833.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000461833.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	ENST00000621921.2	Ensembl
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_001450.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_002596.2	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Clariom D Assay	TC2200008513.hg.1	NR_104232.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	TC2200008513.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	NR_001450.3	Refseq
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	NR_002596.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	NR_104232.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	ENST00000382084.8	Ensembl
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	ENST00000382086.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	ENST00000400234.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	ENST00000577714.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	NR_001450.3	Refseq
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	NR_002596.2	Refseq
Affymetrix Human Clariom D Assay	PSR2200161283.hg.1	NR_104232.1	Refseq

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System Message

Genomic Map