Hs03298149_s1

• Gene Symbol: CPS1-IT1
• Gene Name: CPS1 intronic transcript 1
• Gene Aliases: CPS1-IT, CPS1IT, CPS1IT1, PRO0132
• Chromosome Location: Chr.2: 210617571 - 210619876 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: CPS1-IT1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_002763.2		1	447		137
GenBank mRNA	AF090897.1	-	1	456		137

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AF063570.1	-	1	456		Chr. 2 - 210617571 - 210618261 [+] on Build GRCh38	137
GenBankmRNA	AI110695.1	-	1	456		Chr. 2 - 210617571 - 210618261 [+] on Build GRCh38	137

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	LanC like 1	LANCL1	GPR69A, p40	-140.0kb	Anti-sense	Chr. 2 - 210431249 - 210477618 on NCBI Build GRCh38
Downstream	erb-b2 receptor tyrosine kinase 4	ERBB4	ALS19, HER4, p180erbB4	755.8kb	Anti-sense	Chr. 2 - 211375717 - 212539147 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200010660.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02001247.hg.1

Additional Information:

This assay is in the 5'UTR region of the AF090897.1 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR02019261.hg.1	TC02001247.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02019261.hg.1	NR_002763.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200010660.hg.1	ENST00000628368.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200010660.hg.1	NR_002763.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200175684.hg.1	ENST00000628368.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200175684.hg.1	NR_002763.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200175684.hg.1	ENST00000628368.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200175684.hg.1	NR_002763.2	Refseq
Affymetrix Human Clariom D Assay	PSR0200175684.hg.1	TC0200010660.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0200010660.hg.1	ENST00000628368.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200010660.hg.1	NR_002763.2	Refseq