SCARNA1
Genomic Map
Back To TopAssay Details
| Gene Symbol: SCARNA1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_002997.1 | 1 | 55 | 71 | ||
| GenBank mRNA | AJ609484.1 | - | 1 | 55 | 71 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0100007539.hg.1This assay targets the same location as HTA transcript cluster(s) TC01000371.hg.1
Set Membership: |
Amplicon length between 71 and 85
3' Most
Detect Genomic DNA
Recommended Assay
Homo sapiens
Inventoried
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3344492 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4011 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4012 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 44094 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3344492 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_33_P3344492 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127759 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127742 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127744 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127754 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127766 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00106455 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00106465 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127751 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127738 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127763 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127760 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127755 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127768 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127753 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127765 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00106456 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127757 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127745 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00106448 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15042743 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127762 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127768 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127745 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00106455 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127751 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127754 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127742 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00106448 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00106465 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127744 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00106456 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127760 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127766 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127738 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127757 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127759 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127762 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127765 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127755 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127753 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15042743 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20127763 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106430 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106448 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106451 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15042743 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106431 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106468 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106455 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15042744 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106434 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106460 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106435 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106441 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106428 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106439 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15042747 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15042735 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106453 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106456 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106467 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15042746 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106432 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15042738 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106445 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106464 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106443 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106450 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106462 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00106472 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_002997_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 7899393 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 7899392 | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR01005724.hg.1 | TC01000371.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR01005724.hg.1 | ENST00000517138.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR01005724.hg.1 | NR_002997.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100007539.hg.1 | ENST00000517138.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100007539.hg.1 | NR_002997.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100152729.hg.1 | ENST00000517138.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100152729.hg.1 | NR_002997.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100152729.hg.1 | ENST00000517138.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100152729.hg.1 | NR_002997.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100152729.hg.1 | TC0100007539.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0100007539.hg.1 | ENST00000517138.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100007539.hg.1 | NR_002997.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A018727 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A018727 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3241016 | NR_002997.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3241016 | AJ609484.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3241016 | NR_002997.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3241016 | AJ609484.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3241016 | NR_002997.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3241016 | AJ609484.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3241016 | NR_002997.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3241016 | AJ609484.1 | human_transcriptome |
Back To Top