SNORA71C
Genomic Map
Back To TopAssay Details
| Gene Symbol: SNORA71C | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_003017.2 | 1 | 76 | 99 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | small nucleolar RNA host gene 17 | SNHG17 | Sense | Chr. 20 - 38420592 - 38435375 on NCBI Build GRCh38 | ||
| Downstream |
small nucleolar RNA, H/ACA box 71D |
SNORA71D | U71d | 4.1kb | Sense | Chr. 20 - 38433862 - 38433999 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC2000009072.hg.1This assay targets the same location as HTA transcript cluster(s) TC20000840.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31804549 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156472 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31804554 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156476 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31804552 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156492 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156494 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156485 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156473 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156486 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156471 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156490 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156478 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156484 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156480 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156476 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156490 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31804552 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156494 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156471 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156472 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31804549 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156480 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156485 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156486 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31804554 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156473 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156492 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156478 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P11156484 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156499 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156471 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156445 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156501 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156512 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156436 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156502 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156485 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156478 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156480 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156510 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17190965 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156476 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156490 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156503 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17190968 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156507 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17190966 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17190962 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156488 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156441 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156515 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156493 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156517 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156452 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156494 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P11156443 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_003017_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8066261 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 8066260 | - | - |
| Affymetrix Human Genome U219 Array | 11763922_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11763922_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR20011554.hg.1 | ENST00000364642.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR20011554.hg.1 | NR_003017.2 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR20011554.hg.1 | TC20000840.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC2000009072.hg.1 | ENST00000364642.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC2000009072.hg.1 | NR_003017.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR2000163628.hg.1 | ENST00000364642.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR2000163628.hg.1 | NR_003017.2 | Refseq |
| Affymetrix Human Clariom D Assay | PSR2000163628.hg.1 | TC2000009072.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR2000163628.hg.1 | ENST00000364642.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR2000163628.hg.1 | NR_003017.2 | Refseq |
| Affymetrix Human Clariom D Assay | TC2000009072.hg.1 | ENST00000364642.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC2000009072.hg.1 | NR_003017.2 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3240216 | NR_003017.2 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3240216 | NR_003017.2 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3240216 | NR_003017.2 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3240216 | NR_003017.2 | human_transcriptome |
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