Hs03301698_m1

• Gene Symbol: PMS2CL
• Gene Name: PMS2 C-terminal like pseudogene
• Gene Aliases: PMS2P13
• Chromosome Location: Chr.7: 6735305 - 6751601 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PMS2CL
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_002217.1		1 - 2	79		123
GenBank mRNA	AB116525.1	-	1 - 2	79		123
	AK296451.1	-	4 - 5	754		123
	BC041364.1	-	8 - 9	834		123
	CR749616.1	-	5 - 6	418		123

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BU171754.1	-	2 - 3	111		Chr. 7 - 6731934 - 6737784 [+] on Build GRCh38	123
GenBankmRNA	BX342213.2	-	4 - 5	769		Chr. 7 - 6729798 - 6737369 [+] on Build GRCh38	123
GenBankmRNA	BX443025.2	-	4 - 5	761		Chr. 7 - 6729805 - 6737289 [+] on Build GRCh38	123
GenBankmRNA	BM453314.1	-	4 - 5	461		Chr. 7 - 6730108 - 6737432 [+] on Build GRCh38	123
GenBankmRNA	BU193656.1	-	4 - 5	327		Chr. 7 - 6730242 - 6737617 [+] on Build GRCh38	123
GenBankmRNA	BG681324.1	-	4 - 5	522		Chr. 7 - 6730045 - 6737420 [+] on Build GRCh38	123

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	zinc finger protein 12	ZNF12	GIOT-3, HZF11, KOX3, ZNF325	-28.3kb	Anti-sense	Chr. 7 - 6688433 - 6706935 on NCBI Build GRCh38
Downstream	radial spoke head 10 homolog B2	RSPH10B2		16.2kb	Sense	Chr. 7 - 6754109 - 6798775 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700013336.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07000072.hg.1

Additional Information:

This assay is in the 5'UTR region of the AB116525.1, AK296451.1, CR749616.1 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

mismatch repair

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07001195.hg.1	ENST00000486256.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07001195.hg.1	NR_002217.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07001195.hg.1	TC07000072.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR07001196.hg.1	ENST00000486256.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07001196.hg.1	NR_002217.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07001196.hg.1	TC07000072.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0700196300.hg.1	ENST00000403974.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700196300.hg.1	NR_002217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700196300.hg.1	TC0700013336.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700196300.hg.1	NR_002217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700196300.hg.1	ENST00000403974.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700196301.hg.1	ENST00000403974.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700196301.hg.1	NR_002217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700196301.hg.1	TC0700013336.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700196301.hg.1	ENST00000403974.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700196301.hg.1	NR_002217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700196302.hg.1	ENST00000403974.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700196302.hg.1	ENST00000431453.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700196302.hg.1	NR_002217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700196302.hg.1	TC0700013336.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0700196302.hg.1	ENST00000403974.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700196302.hg.1	ENST00000431453.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0700196302.hg.1	NR_002217.1	Refseq