Hs03309311_s1

Gene Symbol:

SNORD60 SNHG19

Gene Name:

small nucleolar RNA, C/D box 60

small nucleolar RNA host gene 19

Gene Aliases:

RNU60, U60

SNORD60HG

Chromosome Location:

Chr.16: 2155023 - 2155105 on Build GRCh38

Chromosome Location:

Chr.16: 2154782 - 2155358 on Build GRCh38

Species:

Human

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: SNORD60
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_002736.1		1	36		83
GenBank mRNA	X96660.1	-	1	36		83

Gene Symbol: SNHG19
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
GenBank mRNA	DA194369.1	-	1	289		83

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI699361.1	-	1			Chr. 16 - 2154804 - 2155198 [+] on Build GRCh38	83
GenBankmRNA	BQ771515.1	-	1			Chr. 16 - 2154802 - 2155340 [+] on Build GRCh38	83
GenBankmRNA	DA095544.1	-	1	289		Chr. 16 - 2154799 - 2155358 [-] on Build GRCh38	83
GenBankmRNA	AI140855.1	-	1			Chr. 16 - 2154803 - 2155303 [+] on Build GRCh38	83
GenBankmRNA	AA446990.1	-	1	275		Chr. 16 - 2154911 - 2155344 [-] on Build GRCh38	83
GenBankmRNA	AI870501.1	-	1			Chr. 16 - 2154803 - 2155265 [+] on Build GRCh38	83
GenBankmRNA	AI191822.1	-	1			Chr. 16 - 2154802 - 2155205 [+] on Build GRCh38	83
GenBankmRNA	AI186952.1	-	1			Chr. 16 - 2154802 - 2155210 [+] on Build GRCh38	83

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	RAB26, member RAS oncogene family	RAB26	V46133	-883.0	Anti-sense	Chr. 16 - 2148144 - 2154165 on NCBI Build GRCh38
Downstream	TNF receptor associated factor 7	TRAF7	RFWD1, RNF119	648.0	Anti-sense	Chr. 16 - 2155752 - 2178129 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1600009095.hg.1
This assay targets the same location as HTA transcript cluster(s) TC16000776.hg.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_3851	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09889340	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P30398350	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09889338	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P30398348	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09889339	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P30398349	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P30398349	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P30398350	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P30398348	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09889338	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09889340	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09889339	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889301	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842236	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889313	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889306	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889289	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842231	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889305	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842240	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889339	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889343	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842229	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842242	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889307	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889311	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889291	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842261	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889294	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842239	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889298	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889303	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16842233	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889293	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889290	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889338	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09889304	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	NR_002736_at	-	-
Affymetrix Human Gene 1.0 ST Array	7998723	-	-
Affymetrix Human Gene 1.1 ST Array	7998722	-	-
Affymetrix Human Transcriptome Array 2.0	PSR16011416.hg.1	ENST00000383903.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR16011416.hg.1	NR_002736.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR16011416.hg.1	TC16000776.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1600009095.hg.1	ENST00000383903.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009095.hg.1	ENST00000628177.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1600009095.hg.1	NR_002736.1	Refseq
Affymetrix Human Clariom D Assay	TC1600009095.hg.1	ENST00000383903.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009095.hg.1	ENST00000628177.1	Ensembl
Affymetrix Human Clariom D Assay	TC1600009095.hg.1	NR_002736.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	ENST00000383903.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	ENST00000628177.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	NR_002736.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	ENST00000383903.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	ENST00000628177.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	NR_002736.1	Refseq
Affymetrix Human Clariom D Assay	PSR1600169167.hg.1	TC1600009095.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3238481	NR_002736.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3238481	X96660.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3238481	NR_002736.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3238481	X96660.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3238481	NR_002736.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3238481	X96660.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3238481	NR_002736.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3238481	X96660.1	human_transcriptome