Hs03309409_m1

• Gene Symbol: NPHP3-AS1
• Gene Name: NPHP3 antisense RNA 1
• Gene Aliases: NCRNA00119
• Chromosome Location: Chr.3: 132722342 - 132874206 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: NPHP3-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_002811.1		7 - 8	920		102
GenBank mRNA	BC039375.1	-	7 - 8	920		102
	BC048124.1	-	7 - 8	919		102

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	NPHP3-ACAD11 readthrough (NMD candidate)	NPHP3-ACAD11		-94.2kb	Anti-sense	Chr. 3 - 132558138 - 132722459 on NCBI Build GRCh38
Downstream	transmembrane protein 108	TMEM108	CT124	219.2kb	Sense	Chr. 3 - 133038288 - 133397775 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0300008850.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03000718.hg.1

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03012958.hg.1	TC03000718.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03012958.hg.1	ENST00000463373.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03012958.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000489343.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	TC0300008850.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300163243.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300163243.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300163243.hg.1	ENST00000504440.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300163243.hg.1	NR_002811.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300163243.hg.1	TC0300008850.hg.1	Clariom D TC