SNORA46
Genomic Map
Back To TopAssay Details
| Gene Symbol: SNORA46 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_002978.1 | 1 | 68 | 76 | ||
| GenBank mRNA | AJ609467.1 | - | 1 | 68 | 76 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | SET domain containing 6 | SETD6 | -28.0kb | Anti-sense | Chr. 16 - 58515479 - 58521961 on NCBI Build GRCh38 | |
| Downstream |
small nucleolar RNA, H/ACA box 50A |
SNORA50A |
ACA50, SNORA50, SNORA76A |
11.2kb | Sense | Chr. 16 - 58559796 - 58559931 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1600010491.hg.1This assay targets the same location as HTA transcript cluster(s) TC16001155.hg.1
Set Membership: |
Amplicon length between 71 and 85
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_3982 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_3983 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583886 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583872 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583902 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583900 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583863 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583905 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583848 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583860 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583861 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583908 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583874 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583882 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16901284 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583883 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583870 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16901288 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043572 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583887 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043519 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583878 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583869 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043539 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583865 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583885 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043520 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043529 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583898 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583875 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043576 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583864 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583879 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583891 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583892 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043528 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583890 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043565 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043525 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043558 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043545 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583876 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16901281 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583904 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583901 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583851 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043582 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583895 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583868 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583856 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583908 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583856 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583901 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583861 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583887 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583891 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583882 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16901284 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043545 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583872 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583895 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583875 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043576 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043528 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583892 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583868 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16901288 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583865 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583885 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583886 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P16901281 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043520 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583864 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583851 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583869 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583898 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043582 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043539 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583878 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583863 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583848 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583860 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583900 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043565 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583883 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583905 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583879 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583890 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583876 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043529 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043519 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043558 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043525 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583904 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583902 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583870 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10043572 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P30583874 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043525 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043553 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043551 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043568 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16901284 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043561 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043544 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043521 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043563 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043539 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043522 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043549 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043523 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043570 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043575 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043583 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043548 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043542 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043529 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043566 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043531 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16901285 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043581 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043572 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043535 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043537 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043557 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043578 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10043569 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P16901288 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_002978_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8001747 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 8001746 | - | - |
| Affymetrix Human Genome U219 Array | 11763918_PM_at | - | - |
| Affymetrix Human Genome U219 Array | 11763918_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | TC1600010491.hg.1 | ENST00000384762.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600010491.hg.1 | NR_002978.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR16016101.hg.1 | ENST00000384762.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR16016101.hg.1 | NR_002978.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR16016101.hg.1 | TC16001155.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | TC1600010491.hg.1 | ENST00000384762.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600010491.hg.1 | NR_002978.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1600180732.hg.1 | ENST00000384762.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1600180732.hg.1 | NR_002978.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1600180732.hg.1 | ENST00000384762.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1600180732.hg.1 | NR_002978.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1600180732.hg.1 | TC1600010491.hg.1 | Clariom D TC |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3239276 | NR_002978.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3239276 | AJ609467.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3239276 | NR_002978.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3239276 | AJ609467.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3239276 | NR_002978.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3239276 | AJ609467.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3239276 | NR_002978.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3239276 | AJ609467.1 | human_transcriptome |
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