SNORA5C
Genomic Map
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| Gene Symbol: SNORA5C | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_002991.1 | 1 | 69 | 77 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream |
small nucleolar RNA, H/ACA box 5A |
SNORA5A |
ACA5, ACA5A/B/C |
-424.0 | Sense | Chr. 7 - 45104349 - 45104482 on NCBI Build GRCh38 |
| Downstream |
small nucleolar RNA, H/ACA box 5B |
SNORA5B | ACA5b | 926.0 | Sense | Chr. 7 - 45105968 - 45106099 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0700010949.hg.1This assay targets the same location as HTA transcript cluster(s) TC07001353.hg.1
Set Membership: |
Amplicon length between 71 and 85
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4004 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4005 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05460096 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05460099 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05460097 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05460091 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25682247 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05460091 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05460096 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05460097 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P25682247 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P05460099 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460111 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15936666 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460126 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460117 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460100 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460112 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460091 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460114 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460115 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460109 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460132 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460092 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460107 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460130 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460128 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460096 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460135 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460105 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15936661 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460094 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460104 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460099 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460125 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460121 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460123 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460133 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15936663 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15936664 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460102 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P05460098 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_002991_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8139485 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 8139484 | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR07021143.hg.1 | ENST00000364902.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR07021143.hg.1 | NR_002991.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR07021143.hg.1 | TC07001353.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC0700010949.hg.1 | ENST00000364902.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0700010949.hg.1 | ENST00000364902.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0700010949.hg.1 | NR_002991.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0700010949.hg.1 | NR_002991.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0700178306.hg.1 | ENST00000364902.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0700178306.hg.1 | NR_002991.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0700178306.hg.1 | NR_002991.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0700178306.hg.1 | TC0700010949.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0700178306.hg.1 | ENST00000364902.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0700010949.hg.1 | ENST00000364902.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0700010949.hg.1 | ENST00000364902.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0700010949.hg.1 | NR_002991.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0700010949.hg.1 | NR_002991.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0700178305.hg.1 | ENST00000364902.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0700178305.hg.1 | NR_002991.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0700178305.hg.1 | TC0700010949.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0700178305.hg.1 | ENST00000364902.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0700178305.hg.1 | NR_002991.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3246708 | NR_002991.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3246708 | AM055746.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3246708 | NR_002991.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3246708 | AM055746.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3246708 | NR_002991.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3246708 | AM055746.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3246708 | NR_002991.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3246708 | AM055746.1 | human_transcriptome |
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