SNORD105
Genomic Map
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| Gene Symbol: SNORD105 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_004381.1 | 1 | 41 | 83 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | PPAN-P2RY11 readthrough | PPAN-P2RY11 | Sense | Chr. 19 - 10106223 - 10115389 on NCBI Build GRCh38 | ||
| Downstream |
small nucleolar RNA, C/D box 105B |
SNORD105B | 2.0kb | Sense | Chr. 19 - 10109749 - 10109840 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1900006970.hg.1This assay targets the same location as HTA transcript cluster(s) TC19000170.hg.1
Set Membership: |
Amplicon length between 71 and 85
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4298 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31494088 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31494087 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10880333 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31494086 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10880332 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10880331 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10880330 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10880335 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10880334 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10880335 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31494087 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10880330 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10880334 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31494088 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31494088 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31494087 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10880331 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10880330 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31494086 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10880333 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10880335 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10880334 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10880332 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10880330 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10880335 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31494087 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10880334 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31494088 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880384 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880317 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880354 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17107251 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880330 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17107265 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880377 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880332 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880386 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880379 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880381 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880357 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880333 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880312 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17107262 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880322 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17107278 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880356 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880321 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880308 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880387 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880320 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880314 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880392 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880390 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880368 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880326 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880372 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880382 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880316 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880329 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880315 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880359 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880323 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880363 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880371 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880310 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P17107267 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880361 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P10880374 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_004381_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 8025585 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 8025584 | - | - |
| Affymetrix Human Transcriptome Array 2.0 | TC1900006970.hg.1 | ENST00000386910.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900006970.hg.1 | NR_004381.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR19002614.hg.1 | ENST00000386910.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR19002614.hg.1 | NR_004381.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR19002614.hg.1 | TC19000170.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR1900149528.hg.1 | ENST00000386910.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900149528.hg.1 | NR_004381.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1900149528.hg.1 | TC1900006970.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1900149528.hg.1 | NR_004381.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1900149528.hg.1 | ENST00000386910.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900006970.hg.1 | ENST00000386910.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900006970.hg.1 | NR_004381.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3234984 | NR_004381.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3234984 | NR_004381.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3234984 | NR_004381.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3234984 | NR_004381.1 | human_transcriptome |
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