Name: [Hs03309900_m1] [VLDLR-AS1]
Creator: Thermo Fisher Scientific
Keywords: [VLDLR-AS1] Assay, [VLDLR antisense RNA 1] Assay

Assay Details

Gene Symbol: VLDLR-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_015375.2		2 - 3	431		120
GenBank mRNA	AF424541.1	-	6 - 7	896		120
	BC004474.2	-	2 - 3	431		120
	DA119626.1	-	2 - 3	368		120

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AI820825.1	-	2 - 3	291	Chr. 9 - 2535924 - 2570755 [-] on Build GRCh38	120
GenBankmRNA	DA780128.1	-	2 - 3	343	Chr. 9 - 2525576 - 2621413 [-] on Build GRCh38	120
GenBankmRNA	AI821457.1	-	2 - 3		Chr. 9 - 2535654 - 2539480 [+] on Build GRCh38	120
GenBankmRNA	DR003519.1	-	1 - 2	69	Chr. 9 - 2525691 - 2539456 [-] on Build GRCh38	120
GenBankmRNA	DA785284.1	-	2 - 3	215	Chr. 9 - 2525628 - 2621846 [-] on Build GRCh38	120
GenBankmRNA	BE746797.1	-	2 - 3	408	Chr. 9 - 2535738 - 2622350 [-] on Build GRCh38	120
GenBankmRNA	DA119515.1	-	2 - 3	402	Chr. 9 - 2525674 - 2622351 [-] on Build GRCh38	120
GenBankmRNA	AI733549.1	-	2 - 3	291	Chr. 9 - 2535924 - 2570755 [-] on Build GRCh38	120

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	SMARCA2	BAF190, BRM, NCBRS, SNF2, SNF2L2, SNF2LA, SWI2, Sth1p, hBRM, hSNF2a	-342.7kb	Anti-sense	Chr. 9 - 2015219 - 2193624 on NCBI Build GRCh38
Downstream	very low density lipoprotein receptor	VLDLR	CAMRQ1, CARMQ1, CHRMQ1, VLDL-R, VLDLRCH	82.1kb	Anti-sense	Chr. 9 - 2621679 - 2656103 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900009399.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09000873.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09011605.hg.1	TC09000873.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09011605.hg.1	ENST00000416826.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09011605.hg.1	NR_015375.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000447278.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000447278.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000447278.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000447278.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000599229.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	NR_015375.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	ENST00000599229.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	NR_015375.2	Refseq
Affymetrix Human Clariom D Assay	PSR0900164538.hg.1	TC0900009399.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000416826.2	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000424605.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000447278.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000447278.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000447278.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000447278.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000453601.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	ENST00000599229.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	NR_015375.2	Refseq
Affymetrix Human Clariom D Assay	TC0900009399.hg.1	NR_015375.2	Refseq

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Genomic Map