Assay Details

Gene Symbol: SPANXD
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_032417.3	NP_115793.1	1	292		93
GenBank mRNA	BC005382.1	-	1	51	3935644	93
	BC062672.1	-	1	232	4047937	93
	BM554791.1	-	1	292		93

Gene Symbol: SPANXC
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_022661.3	NP_073152.2	1	51		93

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00010990.hg.1, TC0X00011403.hg.1
This assay targets the same location as HTA transcript cluster(s) TC0X001440.hg.1, TC0X002342.hg.1

Additional Information:

This assay is in the 5'UTR region of the BC005382.1, BC062672.1, NM_022661.3, NM_032417.3 transcripts.

Set Membership:

Amplicon length between 86 and 100

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR0X019064.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X019064.hg.1	NM_032417.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X019064.hg.1	TC0X001440.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR0X019049.hg.1	ENST00000358993.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X019049.hg.1	NM_022661.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X019049.hg.1	TC0X002342.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0X00011402.hg.1	ENST00000370519.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011402.hg.1	ENST00000370519.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011402.hg.1	ENST00000370519.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011402.hg.1	ENST00000370519.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011402.hg.1	ENST00000370519.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011402.hg.1	NM_013453.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011402.hg.1	NM_013453.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011402.hg.1	NM_013453.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011402.hg.1	NM_013453.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011403.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011403.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011403.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011403.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011403.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00011403.hg.1	NM_032417.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011403.hg.1	NM_032417.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011403.hg.1	NM_032417.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011403.hg.1	NM_032417.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00011403.hg.1	NM_032417.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00008608.hg.1	ENST00000370518.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00008608.hg.1	ENST00000370518.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00008608.hg.1	ENST00000370518.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00008608.hg.1	ENST00000370518.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00008608.hg.1	ENST00000370518.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00008608.hg.1	NM_145662.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00008608.hg.1	NM_145662.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00008608.hg.1	NM_145662.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00008608.hg.1	NM_145662.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00010990.hg.1	ENST00000358993.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00010990.hg.1	ENST00000358993.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00010990.hg.1	ENST00000358993.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00010990.hg.1	ENST00000358993.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00010990.hg.1	NM_022661.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00010990.hg.1	NM_022661.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00010990.hg.1	NM_022661.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00010990.hg.1	NM_022661.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00010990.hg.1	NM_022661.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X019063.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR0X019063.hg.1	NM_032417.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR0X019063.hg.1	TC0X001440.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC0X00011403.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011403.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011403.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011403.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011403.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011403.hg.1	NM_032417.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00011403.hg.1	NM_032417.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00011403.hg.1	NM_032417.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00011403.hg.1	NM_032417.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00011403.hg.1	NM_032417.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00010990.hg.1	ENST00000358993.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00010990.hg.1	ENST00000358993.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00010990.hg.1	ENST00000358993.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00010990.hg.1	ENST00000358993.2	Ensembl
Affymetrix Human Clariom D Assay	TC0X00010990.hg.1	NM_022661.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00010990.hg.1	NM_022661.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00010990.hg.1	NM_022661.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00010990.hg.1	NM_022661.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00010990.hg.1	NM_022661.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00174665.hg.1	ENST00000358993.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00174665.hg.1	NM_022661.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00174665.hg.1	TC0X00010990.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00174665.hg.1	NM_022661.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00174665.hg.1	ENST00000358993.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00174666.hg.1	NM_022661.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00174666.hg.1	TC0X00010990.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00174666.hg.1	NM_022661.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00179145.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00179145.hg.1	NM_032417.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00179145.hg.1	TC0X00011403.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00179145.hg.1	NM_032417.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00179145.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00174667.hg.1	TC0X00010990.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00179147.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00179147.hg.1	NM_032417.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00179147.hg.1	TC0X00011403.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00179147.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00179147.hg.1	NM_032417.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00011402.hg.1	ENST00000370519.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011402.hg.1	ENST00000370519.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011402.hg.1	ENST00000370519.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011402.hg.1	ENST00000370519.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011402.hg.1	ENST00000370519.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00011402.hg.1	NM_013453.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00011402.hg.1	NM_013453.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00011402.hg.1	NM_013453.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00011402.hg.1	NM_013453.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00008608.hg.1	ENST00000370518.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00008608.hg.1	ENST00000370518.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00008608.hg.1	ENST00000370518.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00008608.hg.1	ENST00000370518.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00008608.hg.1	ENST00000370518.3	Ensembl
Affymetrix Human Clariom D Assay	TC0X00008608.hg.1	NM_145662.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00008608.hg.1	NM_145662.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00008608.hg.1	NM_145662.3	Refseq
Affymetrix Human Clariom D Assay	TC0X00008608.hg.1	NM_145662.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00179144.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00179144.hg.1	NM_032417.3	Refseq
Affymetrix Human Clariom D Assay	PSR0X00179144.hg.1	TC0X00011403.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00179144.hg.1	ENST00000370515.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00179144.hg.1	NM_032417.3	Refseq

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