SNORA16B
Genomic Map
Back To TopAssay Details
| Gene Symbol: SNORA16B | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_004389.1 | 1 | 58 | 86 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | uncharacterized LOC101929541 | LOC101929541 | -67.8kb | Anti-sense | Chr. 1 - 212213002 - 212285021 on NCBI Build GRCh38 | |
| Downstream | transmembrane protein 206 | TMEM206 | C1orf75 | 11.5kb | Anti-sense | Chr. 1 - 212364474 - 212415508 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0100011523.hg.1This assay targets the same location as HTA transcript cluster(s) TC01001773.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4305 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841168 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841166 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841172 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841181 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841187 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841179 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15171755 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841164 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841171 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841175 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841192 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841176 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841170 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841158 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841198 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00778087 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841184 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841161 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841186 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841155 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00778123 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841196 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841199 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00778082 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841194 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841157 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841180 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841174 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00778121 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15171758 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15171762 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841188 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00778081 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841191 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00778124 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841189 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841181 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841166 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841176 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841180 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841191 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841157 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841171 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15171758 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841198 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00778124 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841164 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00778082 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841188 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841189 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15171755 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841175 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841172 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841174 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841158 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841184 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841199 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00778087 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841186 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841196 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841179 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00778123 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15171762 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841187 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00778081 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841155 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00778121 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841170 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841168 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841194 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841192 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20841161 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778107 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778083 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15171761 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778082 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778098 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778101 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15171765 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778096 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778087 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778075 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778111 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778118 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778109 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778088 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15171754 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778124 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778122 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778090 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778084 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778077 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778081 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778093 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778091 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778104 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778105 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778116 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778113 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778115 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00778120 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Gene 1.0 ST Array | NR_004389_at | - | - |
| Affymetrix Human Gene 1.0 ST Array | 7909602 | - | - |
| Affymetrix Human Gene 1.1 ST Array | 7909601 | - | - |
| Affymetrix Human Genome U219 Array | 11763911_at | - | - |
| Affymetrix Human Genome U219 Array | 11763911_PM_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR01027752.hg.1 | TC01001773.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR01027752.hg.1 | ENST00000364674.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR01027752.hg.1 | NR_004389.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100011523.hg.1 | ENST00000364674.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100011523.hg.1 | NR_004389.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100184874.hg.1 | ENST00000364674.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100184874.hg.1 | NR_004389.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100184874.hg.1 | ENST00000364674.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100184874.hg.1 | NR_004389.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100184874.hg.1 | TC0100011523.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0100011523.hg.1 | ENST00000364674.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100011523.hg.1 | NR_004389.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3248658 | NR_004389.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3248658 | NR_004389.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3248658 | NR_004389.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3248658 | NR_004389.1 | human_transcriptome |
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