Hs03460277_m1

• Gene Symbol: E2F6
• Gene Name: E2F transcription factor 6
• Gene Aliases: E2F-6
• Chromosome Location: Chr.2: 11444375 - 11466177 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: E2F6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001278276.1	NP_001265205.1	1 - 2	405		102
GenBank mRNA	AY551348.1	-	1 - 2	107		102
	BU076470.1	-	1 - 2	83		102

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA196623.1	-	1 - 2	381		Chr. 2 - 11455346 - 11466153 [-] on Build GRCh38	102
GenBankmRNA	BI562578.1	-	1 - 2	366		Chr. 2 - 11453601 - 11466136 [-] on Build GRCh38	102
GenBankmRNA	DA642382.1	-	1 - 2	384		Chr. 2 - 11453746 - 11466156 [-] on Build GRCh38	102
GenBankmRNA	DB201808.1	-	1 - 2	386		Chr. 2 - 11455342 - 11466158 [-] on Build GRCh38	102
GenBankmRNA	BX380302.2	-	1 - 2	374		Chr. 2 - 11451658 - 11466146 [-] on Build GRCh38	102
GenBankmRNA	BX401209.2	-	1 - 2	361		Chr. 2 - 11451652 - 11466133 [-] on Build GRCh38	102
GenBankmRNA	DA906604.1	-	1 - 2	371		Chr. 2 - 11455342 - 11466143 [-] on Build GRCh38	102
GenBankmRNA	DB036980.1	-	1 - 2	353		Chr. 2 - 11455406 - 11466125 [-] on Build GRCh38	102

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	long intergenic non-protein coding RNA 570	LINC00570	ncRNA-a5	-54.1kb	Anti-sense	Chr. 2 - 11393981 - 11403077 on NCBI Build GRCh38
Downstream	growth regulation by estrogen in breast cancer 1	GREB1		67.9kb	Anti-sense	Chr. 2 - 11534116 - 11642788 on NCBI Build GRCh38

More Information

Additional Information:

This assay is in the 5'UTR region of the AY551348.1, NM_001278276.1 transcripts.

• Set Membership: Amplicon length greater than or equal to 101, Homo sapiens, Probe spans exons

Panther Classification:

Molecular Function -

RNA metabolism protein, nucleic acid metabolism protein, general transcription factor

Gene Ontology Categories:

Process(es)

regulation of transcription involved in G1/S transition of mitotic cell cycle
negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
transcription corepressor activity
protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2200006694.hg.1	ENST00000441743.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200006694.hg.1	ENST00000441743.1	Ensembl