Name: [Hs03460394_g1] [NAPSB]
Creator: Thermo Fisher Scientific
Keywords: [NAPSB] Assay, [napsin B aspartic peptidase, pseudogene] Assay

Assay Details

Gene Symbol: NAPSB
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_002798.1		2 - 3	223		66
GenBank mRNA	AF090387.1	-	2 - 3	230		66
	AF098485.1	-	2 - 3	230		66
	AF200344.1	-	2 - 3	231		66
	AK300884.1	-	2 - 3	234		66
	AK310134.1	-	2 - 3	241		66
	BC085008.1	-	2 - 3	176		66
	BC111705.1	-	2 - 3	220		66

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BG397752.1	-	2 - 3	176	Chr. 19 - 50334866 - 50344694 [-] on Build GRCh38	66
GenBankmRNA	BG686486.1	-	2 - 3	237	Chr. 19 - 50334916 - 50344761 [-] on Build GRCh38	66
GenBankmRNA	CD695647.1	-	2 - 3	282	Chr. 19 - 50337008 - 50344767 [-] on Build GRCh38	66
GenBankmRNA	BX280089.1	-	2 - 3	224	Chr. 19 - 50336661 - 50344749 [-] on Build GRCh38	66
GenBankmRNA	BM148020.1	-	2 - 3	243	Chr. 19 - 50337029 - 50344767 [-] on Build GRCh38	66
GenBankmRNA	BQ056397.1	-		219	Chr. - - [-] on Build	66
GenBankmRNA	BQ058202.1	-	2 - 3	221	Chr. 19 - 50334840 - 50344746 [-] on Build GRCh38	66
GenBankmRNA	BQ055813.1	-	2 - 3	218	Chr. 19 - 50334345 - 50344743 [-] on Build GRCh38	66
GenBankmRNA	BQ065664.1	-		242	Chr. - - [-] on Build	66
GenBankmRNA	BI755476.1	-	2 - 3	218	Chr. 19 - 50334890 - 50344730 [-] on Build GRCh38	66
GenBankmRNA	DA967526.1	-	2 - 3	241	Chr. 19 - 50336621 - 50344766 [-] on Build GRCh38	66
GenBankmRNA	BQ073045.1	-	2 - 3	239	Chr. 19 - 50334321 - 50344748 [-] on Build GRCh38	66
GenBankmRNA	BI770569.1	-	2 - 3		Chr. 19 - 50335059 - 50344748 [-] on Build GRCh38	66
GenBankmRNA	BG014627.1	-	1 - 2	80	Chr. 19 - 50336624 - 50337605 [-] on Build GRCh38	66
GenBankmRNA	BG757299.1	-	2 - 3	177	Chr. 19 - 50334832 - 50344701 [-] on Build GRCh38	66
GenBankmRNA	BM548440.1	-		237	Chr. - - [-] on Build	66
GenBankmRNA	DR007141.1	-	2 - 3	245	Chr. 19 - 50334634 - 50344763 [-] on Build GRCh38	66
GenBankmRNA	DA921137.1	-	2 - 3	234	Chr. 19 - 50336604 - 50344759 [-] on Build GRCh38	66
GenBankmRNA	BM454189.1	-		232	Chr. - - [-] on Build	66
GenBankmRNA	BQ055704.1	-	2 - 3	218	Chr. 19 - 50334851 - 50344743 [-] on Build GRCh38	66
GenBankmRNA	BM906053.1	-		215	Chr. - - [-] on Build	66
GenBankmRNA	BG398502.1	-	2 - 3		Chr. 19 - 50336752 - 50344760 [-] on Build GRCh38	65
GenBankmRNA	BG685513.1	-		198	Chr. - - [-] on Build	66
GenBankmRNA	BG756270.1	-	2 - 3	216	Chr. 19 - 50334890 - 50344741 [-] on Build GRCh38	66
GenBankmRNA	BI764577.1	-	2 - 3	224	Chr. 19 - 50336537 - 50344749 [-] on Build GRCh38	66
GenBankmRNA	BG397802.1	-	2 - 3		Chr. 19 - 50335128 - 50344742 [-] on Build GRCh38	68
GenBankmRNA	BM459423.1	-		234	Chr. - - [-] on Build	66
GenBankmRNA	BJ996196.1	-	2 - 3	234	Chr. 19 - 50336690 - 50344759 [-] on Build GRCh38	66
GenBankmRNA	BI835323.1	-	1 - 2		Chr. 19 - 50334881 - 50337579 [-] on Build GRCh38	66
GenBankmRNA	BI770570.1	-	2 - 3	223	Chr. 19 - 50334843 - 50344748 [-] on Build GRCh38	66
GenBankmRNA	BF238238.1	-	2 - 3	216	Chr. 19 - 50336534 - 50344741 [-] on Build GRCh38	66
GenBankmRNA	BG398256.1	-	2 - 3	236	Chr. 19 - 50336721 - 50344760 [-] on Build GRCh38	66

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	potassium voltage-gated channel subfamily C member 3	KCNC3	KSHIIID, KV3.3, SCA13	-3.8kb	Sense	Chr. 19 - 50311942 - 50333515 on NCBI Build GRCh38
Downstream	napsin A aspartic peptidase	NAPSA	KAP, Kdap, NAP1, NAPA, SNAPA	20.8kb	Sense	Chr. 19 - 50358472 - 50369331 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1900011195.hg.1
This assay targets the same location as HTA transcript cluster(s) TC19001745.hg.1

Set Membership:

Amplicon length less than or equal to 70

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

1700

Probe spans exons

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR19023763.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023763.hg.1	ENST00000527780.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023763.hg.1	ENST00000534096.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023763.hg.1	ENST00000534789.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023763.hg.1	NR_002798.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19023763.hg.1	TC19001745.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19023764.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023764.hg.1	ENST00000527780.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023764.hg.1	ENST00000534096.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023764.hg.1	ENST00000534789.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023764.hg.1	NR_002798.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19023764.hg.1	TC19001745.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR19023765.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023765.hg.1	ENST00000527780.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023765.hg.1	ENST00000534096.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023765.hg.1	ENST00000534789.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR19023765.hg.1	NR_002798.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR19023765.hg.1	TC19001745.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000531692.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000531692.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000531692.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000531692.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	TC1900011195.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194014.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	TC1900011195.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194012.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	TC1900011195.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1900194013.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000525179.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000527780.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000531692.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000531692.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000531692.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000531692.1	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534096.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000534789.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	ENST00000562112.5	Ensembl
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	NR_002798.1	Refseq
Affymetrix Human Clariom D Assay	TC1900011195.hg.1	NR_002798.1	Refseq

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System Message

Genomic Map