Name: [Hs03461946_m1] [PMCHL1]
Creator: Thermo Fisher Scientific
Keywords: [PMCHL1] Assay, [pro-melanin concentrating hormone like 1 (pseudogene)] Assay

Assay Details

Gene Symbol: PMCHL1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_003921.1		1 - 2	227		152
GenBank mRNA	AY008407.1	-	1 - 2	227		152
	AY008408.1	-	1 - 2	227		152
	AY008409.1	-	1 - 2	227		152
	AY008410.1	-	1 - 2	227		152
	EU921426.1	-	1 - 2	97		152
	EU921427.1	-	1 - 2	97		152
	EU921428.1	-	1 - 2			152
	EU921429.1	-	1 - 2	97		152
	EU921430.1	-	1 - 2	97		152

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BX091674.1	-	1 - 2	115		Chr. 5 - 22142464 - 22152246 [+] on Build GRCh38	152

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	glucuronidase, beta pseudogene 1	GUSBP1		-553.0kb	Sense	Chr. 5 - 21459480 - 21589372 on NCBI Build GRCh38
Downstream	PR domain 9	PRDM9	MEISETZ, MSBP3, PFM6, ZNF899	1.4mb	Sense	Chr. 5 - 23507609 - 23528597 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0500006935.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05000111.hg.1

Set Membership:

Amplicon length greater than or equal to 101

Homo sapiens

1700

Probe spans exons

Panther Classification:

Molecular Function -

peptide hormone

intercellular signal molecule

MicroArray Probes:

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR05001179.hg.1	TC05000111.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05001179.hg.1	ENST00000418902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05001179.hg.1	NR_003921.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000423102.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000423102.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	NR_003921.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	NR_003921.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	NR_003921.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500006935.hg.1	NR_003921.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05001181.hg.1	TC05000111.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05001181.hg.1	ENST00000418902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR05001181.hg.1	NR_003921.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000457791.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000457791.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000523548.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000523548.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	ENST00000523548.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500146986.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146986.hg.1	ENST00000423102.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146986.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146986.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146986.hg.1	NR_003921.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500146986.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146986.hg.1	ENST00000423102.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146986.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146986.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146986.hg.1	NR_003921.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500146986.hg.1	TC0500006935.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0500146989.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146989.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146989.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146989.hg.1	NR_003921.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500146989.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146989.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146989.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500146989.hg.1	NR_003921.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500146989.hg.1	TC0500006935.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000415808.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000450213.6	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000457791.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000457791.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000523548.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000523548.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	ENST00000523548.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Clariom D Assay	TC0500007722.hg.1	NR_003922.1	Refseq
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000418902.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000423102.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000423102.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000423301.5	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	ENST00000430902.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	NR_003921.1	Refseq
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	NR_003921.1	Refseq
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	NR_003921.1	Refseq
Affymetrix Human Clariom D Assay	TC0500006935.hg.1	NR_003921.1	Refseq

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System Message

Genomic Map