Name: [Hs03464419_s1] [SNORD9]
Creator: Thermo Fisher Scientific
Keywords: [SNORD9] Assay, [small nucleolar RNA, C/D box 9] Assay

Assay Details

Gene Symbol: SNORD9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_003029.2		1	66		103

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BE172294.1	-	1			Chr. 14 - 21392142 - 21392299 [+] on Build GRCh38	103

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	chromodomain helicase DNA binding protein 8	CHD8	AUTS18, HELSNF1		Sense	Chr. 14 - 21385194 - 21437298 on NCBI Build GRCh38
Downstream	small nucleolar RNA, C/D box 8	SNORD8	RNU6C, mgU6-53	5.0kb	Sense	Chr. 14 - 21397293 - 21397401 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1400008632.hg.1
This assay targets the same location as HTA transcript cluster(s) TC14000918.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_4062	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615197	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P16684035	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615209	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615204	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158399	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615207	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158395	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615223	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615232	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615219	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615217	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158389	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158409	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615224	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P16684029	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P16684027	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158401	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615230	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615228	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158402	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158408	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615225	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P16684024	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158405	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P16684032	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615202	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P16684027	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615223	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615228	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615209	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158401	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615217	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615197	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615224	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158399	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615204	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615219	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158395	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158389	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615230	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615225	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158408	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P16684035	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P16684029	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615232	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158405	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P16684024	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615202	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29615207	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158402	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P16684032	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P09158409	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16684026	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158443	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158453	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158413	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158406	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158415	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16684032	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158404	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158410	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158432	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158435	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158341	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158393	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158395	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158345	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16684031	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158390	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158437	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158343	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158337	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158431	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158430	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16684036	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158426	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158349	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158422	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158440	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16684025	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158447	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158455	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158456	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158450	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158340	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158409	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158352	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16684015	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158408	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158452	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16684017	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158334	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158402	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16684012	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158399	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158332	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P16684011	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158339	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158420	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158350	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158396	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158424	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158347	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P09158459	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Genome U219 Array	11763925_PM_x_at	-	-
Affymetrix Human Genome U219 Array	11763924_PM_at	-	-
Affymetrix Human Genome U219 Array	11763924_at	-	-
Affymetrix Human Genome U219 Array	11763925_x_at	-	-
Affymetrix Human Transcriptome Array 2.0	TC1400008632.hg.1	ENST00000362566.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400008632.hg.1	NR_003029.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14010042.hg.1	ENST00000362566.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14010042.hg.1	NR_003029.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14010042.hg.1	TC14000918.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1400162412.hg.1	ENST00000362566.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1400162412.hg.1	NR_003029.2	Refseq
Affymetrix Human Clariom D Assay	PSR1400162412.hg.1	ENST00000362566.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1400162412.hg.1	NR_003029.2	Refseq
Affymetrix Human Clariom D Assay	PSR1400162412.hg.1	TC1400008632.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1400008632.hg.1	ENST00000362566.1	Ensembl
Affymetrix Human Clariom D Assay	TC1400008632.hg.1	NR_003029.2	Refseq

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3244449	NR_003029.2	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3244449	NR_003029.2	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3244449	NR_003029.2	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3244449	NR_003029.2	human_transcriptome

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Catalog #	4426961
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Genomic Map