Hs03660494_g1

• Gene Symbol: LINC00548
• Gene Name: long intergenic non-protein coding RNA 548
• Gene Aliases: -
• Chromosome Location: Chr.13: 40194509 - 40220502 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC00548
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_033877.1		4 - 5	523		101
GenBank mRNA	AK124383.1	-	4 - 5	523		101

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	long intergenic non-protein coding RNA 332	LINC00332	NCRNA00332	-8.2kb	Anti-sense	Chr. 13 - 40181809 - 40189030 on NCBI Build GRCh38
Downstream	long intergenic non-protein coding RNA 598	LINC00598	TTL	149.3kb	Sense	Chr. 13 - 40347132 - 40481006 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1300010034.hg.1
This assay targets the same location as HTA transcript cluster(s) TC13000591.hg.1

• Set Membership: Amplicon length greater than or equal to 101, Detect Genomic DNA, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR13006743.hg.1	NR_033877.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR13006743.hg.1	TC13000591.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR13006742.hg.1	NR_033877.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR13006742.hg.1	TC13000591.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Clariom D Assay	TC1300010034.hg.1	NR_033877.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300167643.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1300167643.hg.1	NR_033877.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300167643.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1300167643.hg.1	NR_033877.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300167643.hg.1	TC1300010034.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1300167644.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1300167644.hg.1	NR_033877.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300167644.hg.1	ENST00000617777.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1300167644.hg.1	NR_033877.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300167644.hg.1	TC1300010034.hg.1	Clariom D TC