Name: [Hs03665292_m1] [KDM4A-AS1]
Creator: Thermo Fisher Scientific
Keywords: [KDM4A-AS1] Assay, [KDM4A antisense RNA 1] Assay

Assay Details

Gene Symbol: KDM4A-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_033827.1		1 - 2	286		73
GenBank mRNA	BC073819.1	-	1 - 2	80		73
GenBank mRNA	BC094867.1	-	1 - 2	286		73

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BE398095.1	-	1 - 2	278	Chr. 1 - 43699878 - 43707310 [-] on Build GRCh38	73
GenBankmRNA	BE267516.1	-	1 - 2	266	Chr. 1 - 43699923 - 43707321 [-] on Build GRCh38	73
GenBankmRNA	BM918225.1	-	1 - 2	78	Chr. 1 - 43700119 - 43707133 [-] on Build GRCh38	73
GenBankmRNA	BI226779.1	-	1 - 2	287	Chr. 1 - 43699880 - 43707341 [-] on Build GRCh38	73
GenBankmRNA	BM051671.1	-	1 - 2	287	Chr. 1 - 43699745 - 43707341 [-] on Build GRCh38	73
GenBankmRNA	BE398137.1	-	1 - 2	285	Chr. 1 - 43700039 - 43707338 [-] on Build GRCh38	73
GenBankmRNA	DA960917.1	-	1 - 2	313	Chr. 1 - 43702683 - 43707367 [-] on Build GRCh38	73
GenBankmRNA	BE397950.1	-	1 - 2	282	Chr. 1 - 43699863 - 43707333 [-] on Build GRCh38	73
GenBankmRNA	BE269084.1	-	1 - 2	266	Chr. 1 - 43699950 - 43707321 [-] on Build GRCh38	73
GenBankmRNA	BI226856.1	-	1 - 2	287	Chr. 1 - 43699977 - 43707341 [-] on Build GRCh38	73

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	lysine demethylase 4A	KDM4A	JHDM3A, JMJD2, JMJD2A, TDRD14A		Anti-sense	Chr. 1 - 43650118 - 43705518 on NCBI Build GRCh38
Downstream	uncharacterized LOC101929592	LOC101929592		2.3kb	Sense	Chr. 1 - 43709392 - 43727343 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100013935.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01002587.hg.1

Set Membership:

Amplicon length between 71 and 85

Mammalian Gene Collection

Homo sapiens

Probe spans exons

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01040268.hg.1	TC01002587.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01040268.hg.1	ENST00000418149.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01040268.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01040268.hg.1	NR_033827.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01040265.hg.1	TC01002587.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01040265.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01040265.hg.1	ENST00000418149.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01040265.hg.1	ENST00000434346.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01040265.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01040265.hg.1	ENST00000453015.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01040265.hg.1	NR_033827.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000418149.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000418149.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000418149.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000434346.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000434346.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000434346.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000434346.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000453015.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000453015.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000453015.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	ENST00000453015.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000418149.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000434346.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000453015.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	NR_033827.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000418149.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000434346.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	ENST00000453015.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	NR_033827.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100204230.hg.1	TC0100013935.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100204233.hg.1	ENST00000418149.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204233.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204233.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204233.hg.1	NR_033827.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100204233.hg.1	ENST00000418149.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204233.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204233.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100204233.hg.1	NR_033827.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100204233.hg.1	TC0100013935.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000398804.3	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000418149.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000418149.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000418149.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000434346.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000434346.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000434346.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000434346.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000439057.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000453015.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000453015.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000453015.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	ENST00000453015.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	NR_033827.1	Refseq
Affymetrix Human Clariom D Assay	TC0100013935.hg.1	NR_033827.1	Refseq

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Genomic Map