LOC90246
Genomic Map
Back To TopAssay Details
| Gene Symbol: LOC90246 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_026954.1 | 1 | 2160 | 86 | ||
| GenBank mRNA | AK023635.1 | - | 1 | 1852 | 86 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | GATA2 antisense RNA 1 | GATA2-AS1 | -4.9kb | Sense | Chr. 3 - 128489203 - 128503207 on NCBI Build GRCh38 | |
| Downstream | long intergenic non-protein coding RNA 1565 | LINC01565 |
C3orf27, GR6 |
61.4kb | Anti-sense | Chr. 3 - 128572000 - 128576086 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0300008725.hg.1This assay targets the same location as HTA transcript cluster(s) TC03000676.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574977 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574990 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15487073 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574984 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22714587 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574994 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574979 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574982 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22714559 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574995 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574993 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574974 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574987 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15487065 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574970 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574983 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574986 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574992 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15487071 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22714573 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P22714571 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02574989 | - | - |
| Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M | 259594 | - | - |
| Agilent SurePrint G3 Human CNV Microarray 2x400K | 344197 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_24_P532180 | - | - |
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_44k_24_P532180 | - | - |
| Agilent Whole Human Genome Oligo Microarray 4x44K | 38868 | - | - |
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 54905 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_24_P532180 | - | - |
| SurePrint G3 Human GE Microarray G4851A | A_24_P532180 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574976 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574970 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22714564 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574966 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22714546 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574967 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574968 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22714542 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22714559 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15487065 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574969 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574965 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22714543 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574971 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574979 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574977 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574975 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574968 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574976 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574965 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22714546 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574975 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574971 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22714559 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574979 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22714564 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574977 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15487065 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574966 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574970 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22714542 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574967 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P22714543 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P02574969 | - | - |
| Whole Human Genome Oligo Microarray G4112A | A_24_P532180 | - | - |
| Agilent Whole Human Genome Microarray 4x44K G4112F | A_24_P532180 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P00808662 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574988 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574998 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574952 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15487072 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574996 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574971 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574980 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15487071 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574963 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15487056 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574978 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574983 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574965 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574975 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574955 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574960 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574994 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574957 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574970 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574968 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15487063 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574984 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574986 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574959 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574973 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574958 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15487064 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P02574992 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix HT HG-U133+ PM Array Plate | 233835_PM_at | - | - |
| Affymetrix HT HG-U133+ PM Array Plate | 233830_PM_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR03012114.hg.1 | NR_026954.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR03012114.hg.1 | TC03000676.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR0300162042.hg.1 | NR_026954.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0300162042.hg.1 | TC0300008725.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0300162042.hg.1 | NR_026954.1 | Refseq |
| Human Genome U133 Plus 2.0 Array | 233835_at | - | - |
| Human Genome U133 Plus 2.0 Array | 233830_PM_at | - | - |
| Human Genome U133 Plus 2.0 Array | 233830_at | - | - |
| Human Genome U133 Plus 2.0 Array | 233835_PM_at | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233835_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233835_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233835_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233830_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233835_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233830_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233835_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233830_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233830_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233835_at5 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233830_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233830_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233830_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233835_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233830_at5 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233835_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233830_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233830_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233835_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233835_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233835_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 233830_at7 | - | - |
| Human Genome U95 Set | 92157_PM_r_at | - | - |
| Human Genome U95 Set | 92157_r_at | - | - |
| Human Genome U133 Set | 233830_at | - | - |
| Human Genome U133 Set | 233835_at | - | - |
| Human Genome U133 Set | 233830_PM_at | - | - |
| Human Genome U133 Set | 233835_PM_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A023164 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A023164 | - | - |
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