Hs03668490_s1 Best Coverage

• Gene Symbol: LIMS1
• Gene Name: LIM zinc finger domain containing 1
• Gene Aliases: PINCH, PINCH-1, PINCH1
• Chromosome Location: Chr.2: 108534355 - 108687246 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LIMS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001193482.1	NP_001180411.1	10	3022		110
	NM_001193483.2	NP_001180412.1	10	3167		110
	NM_001193484.1	NP_001180413.1	10	3143		110
	NM_001193485.2	NP_001180414.1	10	3372		110
	NM_001193488.1	NP_001180417.1	10	3090		110
	NM_004987.5	NP_004978.2	10	3052		110
	XM_005263946.1	XP_005264003.1	11	3364		110
	XM_005263948.3	XP_005264005.1	11	3417		110
	XM_005263949.1	XP_005264006.1	11	3359		110
	XM_005263950.1	XP_005264007.1	11	3200		110
	XM_005263951.4	XP_005264008.1	11	3636		110
	XM_017004091.1	XP_016859580.1	11	3386		110
	XM_017004092.1	XP_016859581.1	11	3381		110
	XM_017004093.1	XP_016859582.1	11	3430		110
	XM_017004094.1	XP_016859583.1	11	3665		110
GenBank mRNA	AK025661.1	-	1	1354		110
	AL110164.1	-	1	387		110

More Information

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Detect Genomic DNA, Recommended Assay, Homo sapiens, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene LIMS1

Panther Classification:

Molecular Function -

cell junction protein

Gene Ontology Categories:

Process(es)

epithelial to mesenchymal transition
cell aging
positive regulation of gene expression
positive regulation of cell-substrate adhesion
cell junction assembly
positive regulation of GTPase activity
establishment of protein localization
negative regulation of transcription, DNA-templated
regulation of epithelial cell proliferation
positive regulation of focal adhesion assembly
cellular response to transforming growth factor beta stimulus
positive regulation of substrate adhesion-dependent cell spreading

Function(s)

protein binding
zinc ion binding
protein kinase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC2200007054.hg.1	ENST00000620858.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100016706.hg.1	ENST00000428391.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100016706.hg.1	ENST00000428391.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000440461.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000440461.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000440461.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000440461.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000629474.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000629474.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000629474.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000629474.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000631443.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000631443.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000631443.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000631443.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000632794.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000632794.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000632794.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000632794.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000632794.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000011698.hg.1	ENST00000632794.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010134.hg.1	ENST00000502209.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010134.hg.1	ENST00000502209.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500010134.hg.1	ENST00000502209.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100016706.hg.1	ENST00000428391.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100016706.hg.1	ENST00000428391.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000440461.3	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000440461.3	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000440461.3	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000440461.3	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000629474.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000629474.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000629474.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000629474.2	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000631443.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000631443.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000631443.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000631443.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000632794.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000632794.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000632794.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000632794.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000632794.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000011698.hg.1	ENST00000632794.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200007054.hg.1	ENST00000620858.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500010134.hg.1	ENST00000502209.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500010134.hg.1	ENST00000502209.2	Ensembl
Affymetrix Human Clariom D Assay	TC0500010134.hg.1	ENST00000502209.2	Ensembl