Name: [Hs03670378_s1] [KCNJ2-AS1]
Creator: Thermo Fisher Scientific
Keywords: [KCNJ2-AS1] Assay, [KCNJ2 antisense RNA 1 (head to head)] Assay

Assay Details

Gene Symbol: KCNJ2-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_036534.1		1	2150		69
GenBank mRNA	AK093963.1	-	1	2150		69

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	DB350712.1	-	1		Chr. 17 - 70166961 - 70167482 [+] on Build GRCh38	69
GenBankmRNA	AI365366.1	-	1		Chr. 17 - 70167047 - 70167346 [+] on Build GRCh38	69
GenBankmRNA	BU075887.1	-	1		Chr. 17 - 70167064 - 70167646 [+] on Build GRCh38	69
GenBankmRNA	BM876535.1	-	1		Chr. 17 - 70167064 - 70167613 [+] on Build GRCh38	69
GenBankmRNA	BU783259.1	-	1		Chr. 17 - 70167064 - 70167654 [+] on Build GRCh38	69
GenBankmRNA	DA478300.1	-	1	307	Chr. 17 - 70166992 - 70167557 [-] on Build GRCh38	69
GenBankmRNA	AI918701.1	-	1		Chr. 17 - 70167047 - 70167390 [+] on Build GRCh38	69
GenBankmRNA	AI676186.1	-	1		Chr. 17 - 70167026 - 70167465 [+] on Build GRCh38	69
GenBankmRNA	N48292.1	-	1		Chr. 17 - 70167020 - 70167395 [+] on Build GRCh38	69
GenBankmRNA	BU783360.1	-	1		Chr. 17 - 70167064 - 70167606 [+] on Build GRCh38	69

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	potassium voltage-gated channel subfamily J member 16	KCNJ16	BIR9, KIR5.1	-31.4kb	Anti-sense	Chr. 17 - 70075225 - 70135608 on NCBI Build GRCh38
Downstream	cancer susceptibility candidate 17 (non-protein coding)	CASC17	LINC00600	928.4kb	Sense	Chr. 17 - 71097774 - 71202179 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700011600.hg.1
This assay targets the same location as HTA transcript cluster(s) TC17001833.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_32_P102966	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	6805	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	4641	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_33_P3374778	-	-
Whole Human Genome Oligo Microarray G4112A	A_32_P102966	-	-
Agilent Human 1B Microarray G4111A	A_32_P382958	-	-
Agilent Human 1B Microarray G4111A	A_32_P102959	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT HG-U133+ PM Array Plate	1558234_PM_at	-	-
Affymetrix Human Transcriptome Array 2.0	TC1700011600.hg.1	ENST00000590966.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700011600.hg.1	ENST00000590966.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700011600.hg.1	NR_036534.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700011600.hg.1	NR_036534.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17024691.hg.1	NR_036534.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17024691.hg.1	TC17001833.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1700194045.hg.1	ENST00000590966.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194045.hg.1	NR_036534.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194045.hg.1	TC1700011600.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700194045.hg.1	NR_036534.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194045.hg.1	ENST00000590966.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011600.hg.1	ENST00000590966.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011600.hg.1	ENST00000590966.1	Ensembl
Affymetrix Human Clariom D Assay	TC1700011600.hg.1	NR_036534.1	Refseq
Affymetrix Human Clariom D Assay	TC1700011600.hg.1	NR_036534.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194044.hg.1	ENST00000590966.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194044.hg.1	NR_036534.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700194044.hg.1	TC1700011600.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700194044.hg.1	ENST00000590966.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700194044.hg.1	NR_036534.1	Refseq
Human Genome U133 Plus 2.0 Array	1558234_PM_at	-	-
Human Genome U133 Plus 2.0 Array	1558234_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1558234_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1558234_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1558234_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1558234_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1558234_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1558234_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1558234_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1558234_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1558234_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1558234_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1558234_at3	-	-
Human Genome U95 Set	46824_PM_r_at	-	-
Human Genome U95 Set	46824_r_at	-	-
Human Genome U95 Set	72460_at	-	-
Human Genome U95 Set	72460_PM_at	-	-

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Catalog #	4426961
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Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1910334	AK093963.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1910334	NR_036534.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1910334	AK093963.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1910334	NR_036534.1	human_transcriptome

System Message

Genomic Map