Assay Details

Gene Symbol: LINC01126
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027251.1		1	181		110
GenBank mRNA	BC032412.1	-	1	51	5216225	110

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AW977318.1	-	1	196	Chr. 2 - 43227204 - 43227794 [+] on Build GRCh38	110
GenBankmRNA	AA258160.1	-	1	138	Chr. 2 - 43227254 - 43227621 [+] on Build GRCh38	110
GenBankmRNA	AI378448.1	-	1	138	Chr. 2 - 43227254 - 43227676 [+] on Build GRCh38	110
GenBankmRNA	BI908420.1	-	1	50	Chr. 2 - 43227341 - 43228211 [+] on Build GRCh38	109

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	ZFP36 ring finger protein like 2	ZFP36L2	BRF2, ERF-2, ERF2, RNF162C, TIS11D	-735.0	Anti-sense	Chr. 2 - 43222402 - 43226606 on NCBI Build GRCh38
Downstream	THADA, armadillo repeat containing	THADA	ARMC13, GITA	2.0kb	Anti-sense	Chr. 2 - 43230836 - 43596046 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200007388.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02000267.hg.1

Additional Information:

This assay is in the 5'UTR region of the BC032412.1 transcripts.

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

1700

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Human CGH Microarray 4x180K	123660	-	-
Agilent SurePrint G3 Human CGH Microarray 8x60K	51540	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	696152	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_23_P348911	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_5074	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_23_P348911	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_HS_44k_5073	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	28069	-	-
Agilent Human Genome CGH Microarray 44B	A_14_P117889	-	-
Agilent Human Genome CGH Microarray 44A	A_14_P117889	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	9509	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_23_P348911	-	-
SurePrint G3 Human GE Microarray G4851A	A_23_P348911	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135975	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135965	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21216222	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21216226	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135963	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135971	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21216232	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135964	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21216231	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135977	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135968	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135961	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135967	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135962	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135969	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135980	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135968	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135969	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135962	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135971	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135977	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135975	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135980	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135965	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21216222	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135967	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21216226	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135961	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21216231	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P21216232	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135963	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P01135964	-	-
Whole Human Genome Oligo Microarray G4112A	A_23_P348911	-	-
Agilent Human Genome CGH Microarray 105A (G4412A)	A_14_P117889	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_14_P117889	-	-
Agilent Human Genome CGH Microarray 4x44K	A_14_P117889	-	-
Agilent Whole Human Genome Microarray 4x44K G4112F	A_23_P348911	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	164316	-	-
Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015	8110	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_14_P117889	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01135961	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01135973	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01135980	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01135963	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01135969	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01135967	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01135964	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01135976	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01135971	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01135979	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01135962	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P01135965	-	-
Agilent Human Whole Genome ChIP-on-Chip	A_17_P15237734	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_14_P117889	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	8041641	-	-
Affymetrix Human Gene 1.1 ST Array	8041640	-	-
Affymetrix HT HG-U133+ PM Array Plate	1555124_PM_at	-	-
Affymetrix Human Genome U219 Array	11749570_at	-	-
Affymetrix Human Genome U219 Array	11749570_PM_at	-	-
Affymetrix Human Transcriptome Array 2.0	PSR02003961.hg.1	NR_027251.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02003961.hg.1	TC02000267.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02003960.hg.1	NR_027251.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02003960.hg.1	TC02000267.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0200007388.hg.1	ENST00000623515.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200007388.hg.1	ENST00000623515.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200007388.hg.1	NR_027251.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200007388.hg.1	NR_027251.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200151143.hg.1	ENST00000623515.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0200151143.hg.1	NR_027251.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200151143.hg.1	TC0200007388.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200151143.hg.1	NR_027251.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200151143.hg.1	ENST00000623515.2	Ensembl
Affymetrix Human Clariom D Assay	TC0200007388.hg.1	ENST00000623515.2	Ensembl
Affymetrix Human Clariom D Assay	TC0200007388.hg.1	ENST00000623515.2	Ensembl
Affymetrix Human Clariom D Assay	TC0200007388.hg.1	NR_027251.1	Refseq
Affymetrix Human Clariom D Assay	TC0200007388.hg.1	NR_027251.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200151142.hg.1	ENST00000623515.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0200151142.hg.1	NR_027251.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200151142.hg.1	TC0200007388.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200151142.hg.1	ENST00000623515.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0200151142.hg.1	NR_027251.1	Refseq
Human Genome U133 Plus 2.0 Array	1555124_at	-	-
Human Genome U133 Plus 2.0 Array	1555124_PM_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1555124_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1555124_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1555124_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1555124_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1555124_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1555124_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1555124_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1555124_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1555124_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1555124_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1555124_at8	-	-
Human Genome U95 Set	86219_at	-	-
Human Genome U95 Set	86219_PM_at	-	-
Human Genome U133 Set	231189_PM_at	-	-
Human Genome U133 Set	231189_at	-	-

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A015577	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A015577	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	221725	-	-
ABI Human Genome Survey Microarray Version 2.0	235098	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3187435	NR_027251.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_3187435	BC032412.1	human_transcriptome

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