Hs03677436_m1

• Gene Symbol: PSORS1C3
• Gene Name: psoriasis susceptibility 1 candidate 3 (non-protein coding)
• Gene Aliases: NCRNA00196
• Chromosome Location: Chr.6: 31173735 - 31177899 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PSORS1C3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_026816.1		1 - 2	261		79
GenBank mRNA	LC027945.1	-	2 - 3	553		79

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	POU class 5 homeobox 1	POU5F1	OCT3, OCT4, OTF-3, OTF3, OTF4, Oct-3, Oct-4	-3.5kb	Sense	Chr. 6 - 31164337 - 31170693 on NCBI Build GRCh38
Downstream	HLA complex group 27 (non-protein coding)	HCG27	bCX101P6.9, bPG299F13.9, bQB115I13.2	19.9kb	Anti-sense	Chr. 6 - 31197760 - 31203968 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600011407.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06001522.hg.1, TC6_cox_hap2000154.hg.1, TC6_dbb_hap3000143.hg.1, TC6_mann_hap4000131.hg.1, TC6_mcf_hap5000131.hg.1, TC6_qbl_hap6000144.hg.1, TC6_ssto_hap7000126.hg.1

• Set Membership: Amplicon length between 71 and 85, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2002664.hg.1	TC6_cox_hap2000154.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2002664.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3002601.hg.1	TC6_dbb_hap3000143.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3002601.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5002332.hg.1	TC6_mcf_hap5000131.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5002332.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4002183.hg.1	TC6_mann_hap4000131.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4002183.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5002331.hg.1	TC6_mcf_hap5000131.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mcf_hap5002331.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4002186.hg.1	TC6_mann_hap4000131.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_mann_hap4002186.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6002640.hg.1	TC6_qbl_hap6000144.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6002640.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06017299.hg.1	ENST00000412143.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06017299.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06017299.hg.1	TC06001522.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0600011407.hg.1	ENST00000412143.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011407.hg.1	ENST00000412143.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011407.hg.1	ENST00000412143.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600011407.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011407.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600011407.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06017300.hg.1	ENST00000412143.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06017300.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06017300.hg.1	TC06001522.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7002324.hg.1	TC6_ssto_hap7000126.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7002324.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3002600.hg.1	TC6_dbb_hap3000143.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_dbb_hap3002600.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7002325.hg.1	TC6_ssto_hap7000126.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_ssto_hap7002325.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2002665.hg.1	TC6_cox_hap2000154.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_cox_hap2002665.hg.1	NR_026816.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6002641.hg.1	TC6_qbl_hap6000144.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR6_qbl_hap6002641.hg.1	NR_026816.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600177032.hg.1	ENST00000412143.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600177032.hg.1	NR_026816.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600177032.hg.1	TC0600011407.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600177032.hg.1	NR_026816.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600177032.hg.1	ENST00000412143.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600177036.hg.1	ENST00000412143.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600177036.hg.1	NR_026816.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600177036.hg.1	TC0600011407.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600177036.hg.1	ENST00000412143.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600177036.hg.1	NR_026816.1	Refseq
Affymetrix Human Clariom D Assay	TC0600011407.hg.1	ENST00000412143.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600011407.hg.1	ENST00000412143.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600011407.hg.1	ENST00000412143.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600011407.hg.1	NR_026816.1	Refseq
Affymetrix Human Clariom D Assay	TC0600011407.hg.1	NR_026816.1	Refseq
Affymetrix Human Clariom D Assay	TC0600011407.hg.1	NR_026816.1	Refseq