Hs03678205_m1

• Gene Symbol: PGAP2
• Gene Name: post-GPI attachment to proteins 2
• Gene Aliases: CWH43-N, FRAG1, HPMRS3, MRT17, MRT21
• Chromosome Location: Chr.11: 3797724 - 3826371 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PGAP2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027018.2		2 - 3	104		86
	XM_017017558.1	XP_016873047.1	2 - 3	477		86
GenBank mRNA	AK295202.1	-	2 - 3	104		86

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DC325619.1	-	2 - 3			Chr. 11 - 3808010 - 3824135 [+] on Build GRCh38	87

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	nucleoporin 98	NUP98	ADIR2, NUP196, NUP96	-10.5kb	Anti-sense	Chr. 11 - 3675010 - 3797792 on NCBI Build GRCh38
Downstream	ras homolog family member G	RHOG	ARHG	4.0kb	Anti-sense	Chr. 11 - 3826978 - 3840983 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100006634.hg.1
This assay targets the same location as HTA transcript cluster(s) TC11000085.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK295202.1 transcripts.

• Set Membership: Amplicon length between 86 and 100, Homo sapiens, Probe spans exons

Panther Classification:

Molecular Function -

protein modifying enzyme

Gene Ontology Categories:

Process(es)

GPI anchor biosynthetic process
protein transport
signal transduction in response to DNA damage
intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Function(s)

protein binding
protein transporter activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR11001452.hg.1	ENST00000465307.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11001452.hg.1	ENST00000532017.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR11001452.hg.1	NM_001256235.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11001452.hg.1	NR_027017.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11001452.hg.1	NR_027018.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR11001452.hg.1	TC11000085.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000396991.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000464590.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000465307.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000489571.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000524661.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000528216.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000532017.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	NM_001256235.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	NR_027017.3	Refseq
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	NR_027018.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	NR_104271.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000396991.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000464590.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000465307.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000489571.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000524661.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000528216.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	ENST00000532017.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	NM_001256235.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	NR_027017.3	Refseq
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	NR_027018.2	Refseq
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	NR_104271.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100146430.hg.1	TC1100006634.hg.1	Clariom D TC