Hs03831689_s1

• Gene Symbol: PDE12
• Gene Name: phosphodiesterase 12
• Gene Aliases: 2'-PDE, 2-PDE
• Chromosome Location: Chr.3: 57556247 - 57656480 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PDE12
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001322177.1	NP_001309106.1	2	5087		91
	NM_177966.6	NP_808881.3	3	4914		91
GenBank mRNA	U79276.1	-	1	1049		91

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BX112582.1	-	1			Chr. 3 - 57562525 - 57563292 [-] on Build GRCh38	91
GenBankmRNA	BG055108.1	-	1			Chr. 3 - 57562768 - 57563139 [-] on Build GRCh38	91
GenBankmRNA	AW016888.1	-	1			Chr. 3 - 57562725 - 57563075 [-] on Build GRCh38	91
GenBankmRNA	CD105003.1	-		121		Chr. - - [-] on Build	91
GenBankmRNA	AI949738.1	-	1			Chr. 3 - 57562578 - 57563072 [-] on Build GRCh38	91
GenBankmRNA	HY370141.1	-	1			Chr. 3 - 57562555 - 57563069 [-] on Build GRCh38	91
GenBankmRNA	AI636658.1	-	1			Chr. 3 - 57562629 - 57563072 [-] on Build GRCh38	91
GenBankmRNA	BU628891.1	-	1			Chr. 3 - 57562863 - 57563556 [-] on Build GRCh38	91
GenBankmRNA	EB386946.1	-	1	758		Chr. 3 - 57562198 - 57563037 [+] on Build GRCh38	91

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	dynein axonemal heavy chain 12	DNAH12	DHC3, DLP12, DNAH12L, DNAH7L, DNAHC12, DNAHC3, DNHD2, HDHC3, HL-19, HL19	-17.6kb	Anti-sense	Chr. 3 - 57293699 - 57545203 on NCBI Build GRCh38
Downstream	ADP ribosylation factor 4	ARF4	ARF2	7.8kb	Anti-sense	Chr. 3 - 57571363 - 57597488 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as HTA transcript cluster(s) TC03000369.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene PDE12

Panther Classification:

Molecular Function -

mRNA polyadenylation factor

Gene Ontology Categories:

Process(es)

mRNA processing
RNA phosphodiester bond hydrolysis, exonucleolytic

Function(s)

poly(A)-specific ribonuclease activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR03008001.hg.1	TC03000369.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03008001.hg.1	NM_177966.6	Refseq