Hs03833107_s1

• Gene Symbol: ABCG1
• Gene Name: ATP binding cassette subfamily G member 1
• Gene Aliases: ABC8, WHITE1
• Chromosome Location: Chr.21: 42199689 - 42304389 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ABCG1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_011529806.1	XP_011528108.1	15	10037		64
	XM_011529807.2	XP_011528109.1	15	10059		64
GenBank mRNA	AF086547.1	-	1	146		64

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AW449035.1	-	1			Chr. 21 - 42303993 - 42304389 [-] on Build GRCh38	64
GenBankmRNA	BE550262.1	-	1			Chr. 21 - 42303833 - 42304387 [-] on Build GRCh38	64
GenBankmRNA	AI457531.1	-	1			Chr. 21 - 42303916 - 42304387 [-] on Build GRCh38	64
GenBankmRNA	AI818064.1	-	1			Chr. 21 - 42303907 - 42304389 [-] on Build GRCh38	64
GenBankmRNA	BU742664.1	-	1			Chr. 21 - 42303880 - 42304389 [-] on Build GRCh38	64
GenBankmRNA	AI167798.1	-	1			Chr. 21 - 42304016 - 42304389 [-] on Build GRCh38	64
GenBankmRNA	BE674309.1	-	1			Chr. 21 - 42303821 - 42304389 [-] on Build GRCh38	64
GenBankmRNA	AI150381.1	-	1			Chr. 21 - 42304040 - 42304389 [-] on Build GRCh38	64
GenBankmRNA	W94442.1	-		146		Chr. - - [-] on Build	64
GenBankmRNA	CK299542.1	-	1			Chr. 21 - 42303645 - 42304389 [-] on Build GRCh38	64
GenBankmRNA	BF433594.1	-	1			Chr. 21 - 42303907 - 42304389 [-] on Build GRCh38	64
GenBankmRNA	DB304723.1	-	1			Chr. 21 - 42303833 - 42304388 [-] on Build GRCh38	64
GenBankmRNA	DB325086.1	-	1			Chr. 21 - 42303853 - 42304388 [-] on Build GRCh38	64

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uromodulin like 1	UMODL1		-161.1kb	Sense	Chr. 21 - 42062959 - 42142996 on NCBI Build GRCh38
Downstream	trefoil factor 3	TFF3	ITF, P1B, TFI	7.3kb	Anti-sense	Chr. 21 - 42311667 - 42315596 on NCBI Build GRCh38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

ATP-binding cassette (ABC) transporter, primary active transporter, transporter

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
cholesterol metabolic process
detection of hormone stimulus
response to organic substance
negative regulation of macrophage derived foam cell differentiation
regulation of cholesterol esterification
positive regulation of cholesterol efflux
negative regulation of cholesterol storage
intracellular cholesterol transport
cholesterol efflux
phospholipid efflux
response to lipid
low-density lipoprotein particle remodeling
high-density lipoprotein particle remodeling
glycoprotein transport
lipoprotein metabolic process
cholesterol homeostasis
amyloid precursor protein catabolic process
reverse cholesterol transport
positive regulation of cholesterol biosynthetic process
transmembrane transport
phospholipid homeostasis
response to high density lipoprotein particle
toxin transport

Function(s)

ATP binding
phospholipid binding
phospholipid transporter activity
cholesterol binding
cholesterol transporter activity
toxin transporter activity
sterol-transporting ATPase activity
glycoprotein transporter activity
protein homodimerization activity
ADP binding
protein heterodimerization activity
protein dimerization activity