Hs03834114_s1

Gene Symbol:

FUBP1 NEXN

Gene Name:

far upstream element binding protein 1

nexilin F-actin binding protein

Gene Aliases:

FBP, FUBP, hDH V

CMH20, NELIN

Chromosome Location:

Chr.1: 77944055 - 77979494 on Build GRCh38

Chromosome Location:

Chr.1: 77888515 - 77946329 on Build GRCh38

Species:

Human

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: FUBP1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_011542391.2	XP_011540693.1	22	3032		67
	XM_011542392.2	XP_011540694.1	22	3063		67
	XM_011542393.2	XP_011540695.1	21	3003		67
	XM_017002739.1	XP_016858228.1	23	3054		67
	XM_017002740.1	XP_016858229.1	21	4895		67
	XM_017002741.1	XP_016858230.1	22	3047		67
	XM_017002742.1	XP_016858231.1	21	6148		67
	XM_017002743.1	XP_016858232.1	20	4867		67
	XM_017002744.1	XP_016858233.1	20	6089		67
GenBank mRNA	AL049951.1	-	1	1044		67

Gene Symbol: NEXN
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_005271322.3	XP_005271379.1	14			67
	XM_005271325.3	XP_005271382.1	13			67

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AA251462.1	-	1	217		Chr. 1 - 77944539 - 77944935 [-] on Build GRCh38	67
GenBankmRNA	R36255.1	-		127		Chr. - - [-] on Build	67
GenBankmRNA	CB266957.1	-	1	290		Chr. 1 - 77944366 - 77945006 [-] on Build GRCh38	67
GenBankmRNA	BG621556.1	-	1	394		Chr. 1 - 77944332 - 77945113 [-] on Build GRCh38	67
GenBankmRNA	BE936937.1	-	1	152		Chr. 1 - 77944610 - 77944851 [-] on Build GRCh38	67
GenBankmRNA	AA210753.1	-	1	86		Chr. 1 - 77944526 - 77944804 [-] on Build GRCh38	67
GenBankmRNA	CN483975.1	-	1			Chr. 1 - 77944548 - 77945122 [+] on Build GRCh38	67
GenBankmRNA	BM548607.1	-	1	611		Chr. 1 - 77944404 - 77945319 [-] on Build GRCh38	67
GenBankmRNA	BE936906.1	-	1	138		Chr. 1 - 77944610 - 77944849 [-] on Build GRCh38	67
GenBankmRNA	AW020028.1	-	1	48		Chr. 1 - 77944287 - 77944759 [-] on Build GRCh38	67
GenBankmRNA	AA252456.1	-	1			Chr. 1 - 77944644 - 77944821 [+] on Build GRCh38	67
GenBankmRNA	CB139359.1	-	1	120		Chr. 1 - 77944397 - 77944838 [-] on Build GRCh38	67
GenBankmRNA	AW965105.1	-	1	447		Chr. 1 - 77944515 - 77945165 [-] on Build GRCh38	67
GenBankmRNA	AV747505.1	-	1	159		Chr. 1 - 77944321 - 77944877 [-] on Build GRCh38	67
GenBankmRNA	BE718231.1	-	1			Chr. 1 - 77944668 - 77944858 [+] on Build GRCh38	67
GenBankmRNA	CB137936.1	-	1	120		Chr. 1 - 77944395 - 77944838 [-] on Build GRCh38	67
GenBankmRNA	BE834457.1	-		308		Chr. - - [-] on Build	67
GenBankmRNA	BQ360827.1	-	1			Chr. 1 - 77944656 - 77944858 [+] on Build GRCh38	67
GenBankmRNA	AA460780.1	-	1	416		Chr. 1 - 77944605 - 77945128 [-] on Build GRCh38	67
GenBankmRNA	CN428262.1	-	1	497		Chr. 1 - 77944591 - 77945215 [-] on Build GRCh38	67

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	NEXN antisense RNA 1	NEXN-AS1	C1orf118	-54.5kb	Sense	Chr. 1 - 77881348 - 77889539 on NCBI Build GRCh38
Downstream	DnaJ heat shock protein family (Hsp40) member B4	DNAJB4	DNAJW, DjB4, HLJ1	33.5kb	Anti-sense	Chr. 1 - 77979158 - 78017964 on NCBI Build GRCh38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

RNA metabolism protein, scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
positive regulation of gene expression
regulation of cell migration
cardiac muscle fiber development
regulation of cytoskeleton organization

Function(s)

single-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
poly(A) RNA binding
structural constituent of muscle
actin filament binding