Assay Details

Gene Symbol: SCN1A
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_017004649.1	XP_016860138.1	1	92		96
GenBank mRNA	DQ993522.1	-	1	153		96

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA222509.1	-	1			Chr. 2 - 166148923 - 166171495 [+] on Build GRCh38	96

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC102724058	LOC102724058		-112.6kb	Anti-sense	Chr. 2 - 165957418 - 166036400 on NCBI Build GRCh38
Downstream	sodium voltage-gated channel alpha subunit 9	SCN9A	ETHA, FEB3B, GEFSP7, HSAN2D, NE-NA, NENA, Nav1.7, PN1, SFNP	45.9kb	Sense	Chr. 2 - 166195185 - 166375987 on NCBI Build GRCh38

More Information

Additional Information:

This assay is in the 5'UTR region of the XM_017004649.1 transcripts.
Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

Amplicon length between 86 and 100

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

voltage-gated ion channel

Gene Ontology Categories:

Function(s) Process(es)

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Catalog #	4426961
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System Message

Genomic Map