Hs03847241_s1

• Gene Symbol: PARTICL
• Gene Name: promoter of MAT2A antisense radiation-induced circulating long non-coding RNA
• Gene Aliases: PARTICLE
• Chromosome Location: Chr.2: 85537467 - 85538886 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PARTICL
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038942.1		1	1153		75
GenBank mRNA	BC009563.1	-	1	1153		75

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BE158939.1	-	1	279		Chr. 2 - 85537638 - 85537995 [-] on Build GRCh38	75
GenBankmRNA	AI670824.1	-	1			Chr. 2 - 85537464 - 85537967 [+] on Build GRCh38	75
GenBankmRNA	BE158970.1	-	1	279		Chr. 2 - 85537638 - 85538003 [-] on Build GRCh38	76
GenBankmRNA	CA314335.1	-	1			Chr. 2 - 85537462 - 85538113 [+] on Build GRCh38	75
GenBankmRNA	AI125795.1	-	1			Chr. 2 - 85537462 - 85537860 [+] on Build GRCh38	75
GenBankmRNA	BI966124.1	-	1	117		Chr. 2 - 85537462 - 85537850 [-] on Build GRCh38	75
GenBankmRNA	HY330389.1	-	1			Chr. 2 - 85537469 - 85537926 [+] on Build GRCh38	75
GenBankmRNA	HY330589.1	-	1			Chr. 2 - 85537469 - 85537924 [+] on Build GRCh38	75
GenBankmRNA	BU685487.1	-	1			Chr. 2 - 85537462 - 85538051 [+] on Build GRCh38	75
GenBankmRNA	BX102284.1	-	1	160		Chr. 2 - 85537462 - 85537893 [-] on Build GRCh38	75
GenBankmRNA	HY354032.1	-	1			Chr. 2 - 85537469 - 85537927 [+] on Build GRCh38	75
GenBankmRNA	BM554187.1	-		382		Chr. - - [-] on Build	75
GenBankmRNA	AI908161.1	-	1	331		Chr. 2 - 85537625 - 85538063 [-] on Build GRCh38	75

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	SH2 domain containing 6	SH2D6		-100.4kb	Anti-sense	Chr. 2 - 85418931 - 85437029 on NCBI Build GRCh38
Downstream	methionine adenosyltransferase 2A	MAT2A	MATA2, MATII, SAMS2	92.0	Anti-sense	Chr. 2 - 85538978 - 85545280 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200013277.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02002042.hg.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P01330496	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P21413035	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	706839	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P00421191	-	-
Agilent Human 1B Microarray G4111A	A_32_P350944	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR02032640.hg.1	TC02002042.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02032640.hg.1	NR_038942.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200196941.hg.1	NR_038942.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200196941.hg.1	NR_038942.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200196941.hg.1	TC0200013277.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A013943	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A013943	-	-

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_1849399	NR_038942.1	human_transcriptome
HumanHT-12 v4 Expression BeadChip	ILMN_1849399	BC009563.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_1849399	NR_038942.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_1849399	BC009563.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1849399	NR_038942.1	human_transcriptome
Illumina human-6 v2.0 expression beadchip	ILMN_1849399	BC009563.1	human_transcriptome
Illumina Sentrix Human-6 v2 Expression BeadChip	ILMN_73398	-	-
Illumina HumanRef-6 v2.0 expression beadchip	ILMN_73398	-	-
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1849399	NR_038942.1	human_transcriptome
Illumina HumanWG-6 v3.0 expression beadchip	ILMN_1849399	BC009563.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1849399	NR_038942.1	human_transcriptome
Illumina HumanHT-12 V3.0 expression beadchip	ILMN_1849399	BC009563.1	human_transcriptome
Illumina HumanWG-6_V2_0_R2	ILMN_1849399	NR_038942.1	human_transcriptome
Illumina HumanWG-6_V2_0_R2	ILMN_1849399	BC009563.1	human_transcriptome