Hs03918565_s1

• Gene Symbol: ALMS1-IT1
• Gene Name: ALMS1 intronic transcript 1
• Gene Aliases: -
• Chromosome Location: Chr.2: 73457103 - 73459482 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: ALMS1-IT1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046762.1		1	52		98
GenBank mRNA	BC041487.1	-	1	52		98

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	ALMS1, centrosome and basal body associated protein	ALMS1	ALSS		Sense	Chr. 2 - 73385758 - 73609919 on NCBI Build GRCh38
Downstream	N-acetyltransferase 8 (putative)	NAT8	ATase2, CCNAT, CML1, GLA, Hcml1, TSC501, TSC510	183.4kb	Anti-sense	Chr. 2 - 73640723 - 73642410 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0200008050.hg.1

• Set Membership: Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0200008050.hg.1	ENST00000441587.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200008050.hg.1	ENST00000441587.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200008050.hg.1	ENST00000441587.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200008050.hg.1	NR_046762.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0200008050.hg.1	NR_046762.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200155640.hg.1	ENST00000441587.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0200155640.hg.1	NR_046762.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200155640.hg.1	ENST00000441587.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0200155640.hg.1	NR_046762.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200155640.hg.1	TC0200008050.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0200155641.hg.1	ENST00000441587.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0200155641.hg.1	NR_046762.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200155641.hg.1	ENST00000441587.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0200155641.hg.1	NR_046762.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200155641.hg.1	TC0200008050.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0200008050.hg.1	ENST00000441587.2	Ensembl
Affymetrix Human Clariom D Assay	TC0200008050.hg.1	ENST00000441587.2	Ensembl
Affymetrix Human Clariom D Assay	TC0200008050.hg.1	ENST00000441587.2	Ensembl
Affymetrix Human Clariom D Assay	TC0200008050.hg.1	NR_046762.1	Refseq
Affymetrix Human Clariom D Assay	TC0200008050.hg.1	NR_046762.1	Refseq