Hs03918662_s1

• Gene Symbol: LVCAT1
• Gene Name: liver cancer-associated transcript 1
• Gene Aliases: -
• Chromosome Location: Chr.4: 44016861 - 44022061 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LVCAT1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_131958.1		2	1648		102
	NR_131959.1		2	1541		102
GenBank mRNA	BC042992.1	-	2	1653		102

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DB514787.1	-	1	216		Chr. 4 - 44020872 - 44021281 [+] on Build GRCh38	100
GenBankmRNA	BU633315.1	-	1			Chr. 4 - 44020567 - 44021297 [-] on Build GRCh38	102
GenBankmRNA	DB507763.1	-	1	238		Chr. 4 - 44020856 - 44021281 [+] on Build GRCh38	102
GenBankmRNA	DB521457.1	-	1	266		Chr. 4 - 44020825 - 44021281 [+] on Build GRCh38	102

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	glutaredoxin and cysteine rich domain containing 1	GRXCR1	DFNB25, PPP1R88	-989.1kb	Sense	Chr. 4 - 42893266 - 43030658 on NCBI Build GRCh38
Downstream	potassium channel tetramerization domain containing 8	KCTD8		151.8kb	Anti-sense	Chr. 4 - 44173903 - 44448885 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0400007393.hg.1

• Set Membership: Amplicon length between 86 and 100, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	ENST00000507639.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	ENST00000507639.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	NR_131958.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	NR_131958.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	NR_131958.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	NR_131958.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	NR_131958.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	NR_131959.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	NR_131959.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	NR_131959.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	NR_131959.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400007393.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150494.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150494.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150494.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150494.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150494.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150494.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150494.hg.1	TC0400007393.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0400150491.hg.1	ENST00000507639.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150491.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150491.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150491.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150491.hg.1	ENST00000507639.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150491.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150491.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150491.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150491.hg.1	TC0400007393.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	ENST00000507639.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	ENST00000507639.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	TC0400007393.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150488.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150488.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150488.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150488.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150488.hg.1	TC0400007393.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0400150492.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150492.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150492.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150492.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150492.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150492.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150492.hg.1	TC0400007393.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0400150493.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150493.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150493.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150493.hg.1	ENST00000512678.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150493.hg.1	NR_131958.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150493.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150493.hg.1	TC0400007393.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0400150485.hg.1	ENST00000507639.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150485.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150485.hg.1	ENST00000507639.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0400150485.hg.1	NR_131959.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400150485.hg.1	TC0400007393.hg.1	Clariom D TC