Name: [Hs03918716_s1] [GS1-24F4.2]
Creator: Thermo Fisher Scientific
Keywords: [GS1-24F4.2] Assay, [uncharacterized LOC100652791] Assay

Assay Details

Gene Symbol: GS1-24F4.2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_045217.1		3	950		108
GenBank mRNA	BC043547.1	-	3	950		108

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AI806287.1	-	1		Chr. 8 - 6842053 - 6842472 [-] on Build GRCh38	108
GenBankmRNA	CD557887.1	-	1	615	Chr. 8 - 6841693 - 6842571 [+] on Build GRCh38	108
GenBankmRNA	AI688579.1	-	1		Chr. 8 - 6841941 - 6842445 [-] on Build GRCh38	108
GenBankmRNA	AI240483.1	-	1		Chr. 8 - 6842101 - 6842472 [-] on Build GRCh38	108

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	XK related 5	XKR5	HARL2754, UNQ2754, XRG5A, XRG5BM	-6.0kb	Anti-sense	Chr. 8 - 6808517 - 6835644 on NCBI Build GRCh38
Downstream	defensin beta 1	DEFB1	BD1, DEFB-1, DEFB101, HBD1	28.1kb	Anti-sense	Chr. 8 - 6870575 - 6878007 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800006573.hg.1
This assay targets the same location as HTA transcript cluster(s) TC08000024.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P05940724	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P05940720	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26214190	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P05940722	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P05940721	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P26214186	-	-
Agilent SurePrint G3 Human CGH Microarray 4x180K	58213	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	611091	-	-
Agilent SurePrint G3 Human CNV Microarray 2x400K	328013	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_32_P145764	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_32_P145769	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	40544	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	37099	-	-
Agilent Human Genome CGH + SNP Microarray	A_16_P18204909	-	-
Whole Human Genome Oligo Microarray G4112A	A_32_P145764	-	-
Whole Human Genome Oligo Microarray G4112A	A_32_P145769	-	-
Agilent Human Genome CGH Microarray 105A (G4412A)	A_16_P18204909	-	-
Agilent Human Genome 244K CGH Microarray (Alpha Test)	A_16_P18204909	-	-
Agilent Whole Human Genome Microarray 4x44K G4112F	A_32_P145764	-	-
Agilent Whole Human Genome Microarray 4x44K G4112F	A_32_P145769	-	-
Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522	18314	-	-
Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015	10772	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P18204906	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P18204909	-	-
Agilent Human 1B Microarray G4111A	A_32_P145764	-	-
Agilent SurePrint G3 Human CGH Microarray 2x400K	A_16_P18204909	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR08000365.hg.1	TC08000024.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08000365.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08000365.hg.1	NR_045217.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	ENST00000531701.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	ENST00000531701.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	ENST00000531701.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	ENST00000531701.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08000363.hg.1	TC08000024.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08000363.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08000363.hg.1	NR_045217.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR08000364.hg.1	TC08000024.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR08000364.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR08000364.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144811.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144811.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144811.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144811.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144811.hg.1	TC0800006573.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800144807.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144807.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144807.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144807.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144807.hg.1	TC0800006573.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	ENST00000531701.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	ENST00000531701.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	ENST00000531701.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	ENST00000531701.1	Ensembl
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	TC0800006573.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144809.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144809.hg.1	ENST00000531701.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144809.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144809.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144809.hg.1	ENST00000531701.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144809.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144809.hg.1	TC0800006573.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800144805.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144805.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144805.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144805.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144805.hg.1	TC0800006573.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800144808.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144808.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144808.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144808.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144808.hg.1	TC0800006573.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800144804.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144804.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144804.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144804.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144804.hg.1	TC0800006573.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0800144810.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144810.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144810.hg.1	ENST00000500823.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800144810.hg.1	NR_045217.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800144810.hg.1	TC0800006573.hg.1	Clariom D TC
Human Genome U133 Plus 2.0 Array	1559678_PM_s_at	-	-
Human Genome U133 Plus 2.0 Array	1559678_s_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1559678_s_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1559678_s_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1559678_s_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1559678_s_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1559678_s_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1559678_s_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1559678_s_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1559678_s_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1559678_s_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1559678_s_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1559678_s_at4	-	-

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Genomic Map