Name: [Hs03927388_s1] [PAN3-AS1]
Creator: Thermo Fisher Scientific
Keywords: [PAN3-AS1] Assay, [PAN3 antisense RNA 1] Assay

Assay Details

Gene Symbol: PAN3-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_029383.1		2	1989		80
GenBank mRNA	BC045730.1	-	1	1150		80

Interrogated Sequence		Translated Protein	Exon Boundary	Transcript Location	Amplicon Length
GenBankmRNA	AA835633.1	-	1	Chr. 13 - 28136843 - 28137271 [+] on Build GRCh38	80
GenBankmRNA	AI140189.1	-	1	Chr. 13 - 28136742 - 28137191 [+] on Build GRCh38	80
GenBankmRNA	AW978182.1	-	1	Chr. 13 - 28136848 - 28137379 [+] on Build GRCh38	80
GenBankmRNA	AW592271.1	-	1	Chr. 13 - 28136845 - 28137286 [+] on Build GRCh38	80
GenBankmRNA	DB316789.1	-	1	Chr. 13 - 28136847 - 28137390 [+] on Build GRCh38	80
GenBankmRNA	BM970151.1	-	1	Chr. 13 - 28136843 - 28137509 [+] on Build GRCh38	80
GenBankmRNA	AA805921.1	-	1	Chr. 13 - 28136843 - 28137275 [+] on Build GRCh38	80

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	PAN3 poly(A) specific ribonuclease subunit	PAN3			Anti-sense	Chr. 13 - 28138079 - 28295338 on NCBI Build GRCh38
Downstream	fms related tyrosine kinase 1	FLT1	FLT, FLT-1, VEGFR-1, VEGFR1	162.2kb	Sense	Chr. 13 - 28300346 - 28495128 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1300008454.hg.1
This assay targets the same location as HTA transcript cluster(s) TC13000516.hg.1

Set Membership:

Amplicon length between 71 and 85

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ArrayStar

Array Name	Probe IDs	Targets	Target Type
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188413	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741799	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741822	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741809	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741825	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741820	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741838	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741801	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188397	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188362	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188402	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188374	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188351	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188395	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188358	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741804	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188354	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741843	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188393	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188353	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741813	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188405	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188355	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741817	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188372	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741815	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188415	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188394	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188408	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188423	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741821	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188371	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741830	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741833	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P08741850	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188369	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188400	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188350	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188420	-	-
Agilent Human Whole Genome ChIP Tiling Array	A_17_P29188409	-	-
Agilent SurePrint G3 Human High-Resolution Discovery Microarray 1x1M	369526	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188367	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188405	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188395	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741819	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741804	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188412	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188364	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188414	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741823	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741830	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188413	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188400	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188420	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188360	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188407	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741841	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188351	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188362	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741822	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741843	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741795	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741850	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741833	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188397	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188354	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741820	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188408	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188350	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741838	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188404	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P16621656	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741809	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188415	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188394	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188402	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188417	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188353	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188355	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741802	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741821	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188351	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741833	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741850	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188397	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188350	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188354	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188413	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741819	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188412	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741802	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188415	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188417	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P16621656	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741830	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741823	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188405	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741804	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188400	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188420	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741838	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188394	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188360	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188414	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741822	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741821	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188408	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188367	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741795	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741843	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188395	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188355	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188362	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188402	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188407	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741809	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188404	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188364	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741841	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P08741820	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P29188353	-	-
Agilent Human CGH Whole Genome Microarray 1x1M (G4447A)	A_16_P02743948	-	-
Agilent Human 1B Microarray G4111A	A_32_P414040	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT HG-U133+ PM Array Plate	243092_PM_at	-	-
Affymetrix Human Transcriptome Array 2.0	PSR13005830.hg.1	NR_029383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR13005830.hg.1	TC13000516.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR13005829.hg.1	NR_029383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR13005829.hg.1	TC13000516.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1300008454.hg.1	ENST00000563843.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300008454.hg.1	NR_029383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300008454.hg.1	NR_029383.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300008454.hg.1	NR_029383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300157005.hg.1	ENST00000563843.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1300157005.hg.1	NR_029383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300157005.hg.1	ENST00000563843.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1300157005.hg.1	NR_029383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300157005.hg.1	TC1300008454.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1300157008.hg.1	NR_029383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300157008.hg.1	NR_029383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300157008.hg.1	TC1300008454.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1300008454.hg.1	ENST00000563843.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300008454.hg.1	NR_029383.1	Refseq
Affymetrix Human Clariom D Assay	TC1300008454.hg.1	NR_029383.1	Refseq
Affymetrix Human Clariom D Assay	TC1300008454.hg.1	NR_029383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300157006.hg.1	NR_029383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300157006.hg.1	NR_029383.1	Refseq
Affymetrix Human Clariom D Assay	PSR1300157006.hg.1	TC1300008454.hg.1	Clariom D TC
Human Genome U95 Set	58110_PM_at	-	-
Human Genome U95 Set	58110_at	-	-
Human Genome U133 Set	243092_PM_at	-	-
Human Genome U133 Set	243092_at	-	-

Array Name	Probe IDs	Targets	Target Type
Arraystar Human LncRNA microarray V2.0	ASHG19A3A049362	-	-
Arraystar Human LncRNA microarray V2.0	ASHG19A3A049362	-	-

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Catalog #	4426961
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Genomic Map