Hs03986111_s1 Best Coverage

• Gene Symbol: TOB1
• Gene Name: transducer of ERBB2, 1
• Gene Aliases: APRO5, APRO6, PIG49, TOB, TROB, TROB1
• Chromosome Location: Chr.17: 50862223 - 50867978 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TOB1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001243877.1	NP_001230806.1	3	941		67
	NM_001243885.1	NP_001230814.1	2	752		67
	NM_005749.3	NP_005740.1	2	955		67
GenBank mRNA	AA675891.1	-	2	666		67
	AK313904.1	-	3	942		67
	AY524047.1	-	1	522		67
	BC031406.1	-	1	519	5194914	67
	BC070493.1	-	2	943	6470511	67
	BC098415.1	-	2	947	6480318	67
	BT019380.1	-	1	512		67
	BT019381.1	-	1	512		67
	CR536487.1	-	1	512		67
	CR541686.1	-	1	512		67
	D38305.1	-	1	555		67

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700011121.hg.1
This assay targets the same location as HTA transcript cluster(s) TC17001698.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Homo sapiens, 1700, Inventoried, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene TOB1

Gene Ontology Categories:

Process(es)

SMAD protein import into nucleus
negative regulation of cell proliferation
positive regulation of signal transduction
negative regulation of translation
negative regulation of BMP signaling pathway
negative regulation of osteoblast differentiation
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
negative regulation of nucleic acid-templated transcription

Function(s)

transcription corepressor activity
SH3/SH2 adaptor activity
protein binding
receptor tyrosine kinase binding
SMAD binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR17022796.hg.1	ENST00000268957.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17022796.hg.1	NM_001243877.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17022796.hg.1	TC17001698.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR17022797.hg.1	ENST00000268957.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR17022797.hg.1	NM_001243877.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR17022797.hg.1	TC17001698.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1700189509.hg.1	ENST00000268957.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1700189509.hg.1	NM_001243877.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700189509.hg.1	ENST00000268957.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1700189509.hg.1	NM_001243877.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700189509.hg.1	TC1700011121.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR1700189510.hg.1	ENST00000268957.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1700189510.hg.1	NM_001243877.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700189510.hg.1	ENST00000268957.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1700189510.hg.1	NM_001243877.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700189510.hg.1	TC1700011121.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
ABI Human Genome Survey Microarray Version 2.0	198421	-	-