Hs04186652_s1

• Gene Symbol: NHLRC1
• Gene Name: NHL repeat containing E3 ubiquitin protein ligase 1
• Gene Aliases: EPM2A, EPM2B, MALIN, bA204B7.2
• Chromosome Location: Chr.6: 18120487 - 18122620 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: NHLRC1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_198586.2	NP_940988.2	1	1052		84
GenBank mRNA	AY324850.1	-	1	1052		84
	BC103888.1	-	1	1052	40004980	84
	BC103889.1	-	1	1052	40004983	84
	BC103890.1	-	1	1052	40004985	84

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600010959.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06001300.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene NHLRC1

Gene Ontology Categories:

Process(es)

protein polyubiquitination
glycogen biosynthetic process
autophagy
positive regulation of protein ubiquitination
proteasome-mediated ubiquitin-dependent protein catabolic process

Function(s)

ubiquitin-protein transferase activity
protein binding
zinc ion binding
ligase activity
ubiquitin protein ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0600010959.hg.1	ENST00000340650.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600010959.hg.1	NM_198586.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600010959.hg.1	NM_198586.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600010959.hg.1	NM_198586.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06015628.hg.1	ENST00000340650.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06015628.hg.1	NM_198586.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06015628.hg.1	TC06001300.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC0600010959.hg.1	ENST00000340650.4	Ensembl
Affymetrix Human Clariom D Assay	TC0600010959.hg.1	NM_198586.2	Refseq
Affymetrix Human Clariom D Assay	TC0600010959.hg.1	NM_198586.2	Refseq
Affymetrix Human Clariom D Assay	TC0600010959.hg.1	NM_198586.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600174367.hg.1	ENST00000340650.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0600174367.hg.1	NM_198586.2	Refseq
Affymetrix Human Clariom D Assay	PSR0600174367.hg.1	TC0600010959.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600174367.hg.1	ENST00000340650.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0600174367.hg.1	NM_198586.2	Refseq