Hs04194727_g1

• Gene Symbol: GJA1
• Gene Name: gap junction protein alpha 1
• Gene Aliases: AVSD3, CMDR, CX43, EKVP, GJAL, HLHS1, HSS, ODDD, PPKCA
• Chromosome Location: Chr.6: 121435577 - 121449744 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: GJA1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000165.4	NP_000156.1	2	974		92
GenBank mRNA	AK223289.1	-	2	905		92
	AK294670.1	-	3	673		92
	AK295460.1	-	3	819		92
	AK297402.1	-	2	666		92
	AK297764.1	-	3	858		92
	AK312324.1	-	2	916		92
	BC026329.1	-	2	790	4794131	92
	CR541660.1	-	1	702		92
	M65188.1	-	2	867		92
	X52947.1	-	2	859		92

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600009310.hg.1
This assay targets the same location as HTA transcript cluster(s) TC06000945.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene GJA1

Panther Classification:

Molecular Function -

gap junction

Gene Ontology Categories:

Process(es)

osteoblast differentiation
in utero embryonic development
neuron migration
negative regulation of endothelial cell proliferation
heart looping
regulation of heart rate
epithelial cell maturation
lens development in camera-type eye
chronic inflammatory response
positive regulation of glomerular filtration
endothelium development
atrial ventricular junction remodeling
transport
apoptotic process
muscle contraction
signal transduction
positive regulation of cytosolic calcium ion concentration
cell-cell signaling
heart development
adult heart development
response to pH
response to glucose
vascular transport
positive regulation of gene expression
negative regulation of gene expression
cell communication by chemical coupling
cell communication by electrical coupling
positive regulation of cell communication by chemical coupling
ATP transport
gap junction assembly
negative regulation of cell growth
regulation of bone mineralization
positive regulation of insulin secretion
ion transmembrane transport
response to fluid shear stress
embryonic digit morphogenesis
positive regulation of I-kappaB kinase/NF-kappaB signaling
skeletal muscle tissue regeneration
response to peptide hormone
positive regulation of osteoblast differentiation
positive regulation of protein catabolic process
positive regulation of striated muscle tissue development
positive regulation of vasoconstriction
positive regulation of vasodilation
regulation of bone remodeling
blood vessel morphogenesis
neuron projection morphogenesis
protein oligomerization
regulation of calcium ion transport
negative regulation of cardiac muscle cell proliferation
milk ejection
regulation of ventricular cardiac muscle cell membrane repolarization
regulation of atrial cardiac muscle cell membrane depolarization
regulation of ventricular cardiac muscle cell membrane depolarization
negative regulation of wound healing
cellular response to mechanical stimulus
atrial cardiac muscle cell action potential
cell communication by electrical coupling involved in cardiac conduction
negative regulation of DNA biosynthetic process
regulation of bicellular tight junction assembly
positive regulation of behavioral fear response

Function(s)

signal transducer activity
receptor binding
gap junction channel activity
protein binding
ion transmembrane transporter activity
SH3 domain binding
PDZ domain binding
beta-tubulin binding
connexin binding
gap junction channel activity involved in cardiac conduction electrical coupling
scaffold protein binding
gap junction channel activity involved in cell communication by electrical coupling

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06010986.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010986.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010986.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010986.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010992.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010992.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010992.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010992.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010982.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010982.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010982.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010991.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010991.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010991.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010991.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0500011669.hg.1	ENST00000511478.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010988.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010988.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010988.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010990.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010990.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010990.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010990.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010981.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010981.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010983.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010983.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010983.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010983.hg.1	NM_000165.4	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06010984.hg.1	TC06000945.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06010984.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010984.hg.1	ENST00000440608.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06010984.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163784.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163784.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163784.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163784.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163784.hg.1	TC0600009310.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500011669.hg.1	ENST00000511478.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163787.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163787.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163787.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163787.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163787.hg.1	TC0600009310.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600163788.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163788.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163788.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163788.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163788.hg.1	TC0600009310.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600163783.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163783.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163783.hg.1	TC0600009310.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	TC0600009310.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163785.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163785.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163785.hg.1	ENST00000282561.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0600163785.hg.1	NM_000165.4	Refseq
Affymetrix Human Clariom D Assay	PSR0600163785.hg.1	TC0600009310.hg.1	Clariom D TC