Assay Details

Gene Symbol: MIR138-1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_029700.1		1	47		59

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	abhydrolase domain containing 5	ABHD5	CDS, CGI58, IECN2, NCIE2	-391.5kb	Sense	Chr. 3 - 43690883 - 43722725 on NCBI Build GRCh38
Downstream	testis and ovary specific PAZ domain containing 1	TOPAZ1	C3orf77	127.6kb	Sense	Chr. 3 - 44241886 - 44337071 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC0300007203.hg.1
This assay targets the same location as HTA transcript cluster(s) TC03000233.hg.1

Set Membership:

Amplicon length less than or equal to 70

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338282	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338322	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204669	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204634	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204675	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204622	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338248	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338255	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338321	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204604	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204627	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204612	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338304	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204666	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204637	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204658	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204614	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204676	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338264	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204641	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204647	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204628	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204644	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204642	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338265	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338300	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338301	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204663	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338303	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204608	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338271	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204630	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204678	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204611	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204690	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204600	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204621	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204649	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338319	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204632	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204635	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338293	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204681	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338295	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204655	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338258	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204671	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338263	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204668	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204674	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204626	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204608	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338255	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204627	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204671	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338271	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204644	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338282	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204630	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338301	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204675	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204622	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204604	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338263	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204669	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204649	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204621	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204635	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338322	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204681	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204663	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204611	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204668	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338264	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338300	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204600	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204628	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338258	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338321	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204647	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204674	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338304	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204637	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204642	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204634	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204626	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204614	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338319	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338248	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204658	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204655	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204678	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204690	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338295	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338265	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204666	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204632	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338303	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204676	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204641	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P02204612	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P22338293	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.1 ST Array	8079165	-	-
Affymetrix Human Transcriptome Array 2.0	TC0300007203.hg.1	ENST00000385219.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0300007203.hg.1	NR_029700.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR03004692.hg.1	TC03000233.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR03004692.hg.1	ENST00000385219.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR03004692.hg.1	NR_029700.1	Refseq
Affymetrix Human Clariom D Assay	TC0300007203.hg.1	ENST00000385219.1	Ensembl
Affymetrix Human Clariom D Assay	TC0300007203.hg.1	NR_029700.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300150763.hg.1	ENST00000385219.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300150763.hg.1	NR_029700.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300150763.hg.1	ENST00000385219.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0300150763.hg.1	NR_029700.1	Refseq
Affymetrix Human Clariom D Assay	PSR0300150763.hg.1	TC0300007203.hg.1	Clariom D TC

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3309924	NR_029700.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3309924	NR_029700.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3309924	NR_029700.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3309924	NR_029700.1	human_transcriptome

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Genomic Map