MIR488
Genomic Map
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| Gene Symbol: MIR488 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_030163.1 | 1 | 43 | 70 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | pappalysin 2 | PAPPA2 |
PAPP-A2, PAPP-E, PAPPE, PLAC3 |
-183.8kb | Anti-sense | Chr. 1 - 176463159 - 176845601 on NCBI Build GRCh38 |
| Downstream | BMP/retinoic acid inducible neural specific 2 | BRINP2 |
DBCCR1L2, FAM5B |
141.5kb | Anti-sense | Chr. 1 - 177170922 - 177282422 on NCBI Build GRCh38 |
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Updated Mapping Information
This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.This assay targets the same location as Clariom D transcript cluster(s) TC0100016507.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01003557.hg.1
Set Membership: |
Amplicon length less than or equal to 70
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678232 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678196 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618973 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618950 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678181 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618957 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618978 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678226 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678212 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678241 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678206 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618975 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678195 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618956 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618960 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618952 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678220 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618969 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678231 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678239 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618983 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678204 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678225 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618976 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618971 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678236 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618967 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678227 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678235 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618993 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678215 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618996 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618991 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678238 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618970 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678216 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618987 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15146264 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678222 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678187 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618958 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678215 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678187 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678216 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15146264 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678235 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618956 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618967 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618958 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618970 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678222 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618973 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678241 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618991 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618975 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618971 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678204 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618993 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678231 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678226 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618960 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618969 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678225 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678239 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618978 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678238 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678206 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678232 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678212 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618952 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618983 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618976 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678236 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678195 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678220 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618996 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618950 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618987 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678181 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678196 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20678227 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00618957 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR01055116.hg.1 | ENST00000365739.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR01055116.hg.1 | NR_030163.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR01055116.hg.1 | TC01003557.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016507.hg.1 | ENST00000365739.3 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016507.hg.1 | NR_030163.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100225442.hg.1 | ENST00000365739.3 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100225442.hg.1 | NR_030163.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100225442.hg.1 | TC0100016507.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100225442.hg.1 | NR_030163.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100225442.hg.1 | ENST00000365739.3 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016507.hg.1 | ENST00000365739.3 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016507.hg.1 | NR_030163.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3308778 | NR_030163.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3308778 | NR_030163.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3308778 | NR_030163.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3308778 | NR_030163.1 | human_transcriptome |
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