Assay Details

Gene Symbol: MIR557
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_030284.1		1	52		95

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	T-box 19	TBX19	TBS19, TPIT, dJ747L4.1	-61.1kb	Sense	Chr. 1 - 168281040 - 168314426 on NCBI Build GRCh38
Downstream	uncharacterized LOC100505918	LOC100505918		24.6kb	Anti-sense	Chr. 1 - 168400188 - 168422656 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC0100010529.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01001468.hg.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Detect Genomic DNA

Homo sapiens

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640625	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581073	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581034	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581042	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640606	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581071	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581063	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640618	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581058	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581041	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640630	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581025	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581023	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581061	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581046	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640567	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581036	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581066	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581057	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581044	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640581	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581033	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581060	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581072	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640607	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581059	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581028	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640583	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581022	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15141644	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581082	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15141653	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640620	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581050	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581084	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640626	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640566	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640628	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581056	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581020	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581014	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581047	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581037	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640563	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640608	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640577	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640562	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581045	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640581	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640625	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640566	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581028	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581046	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581022	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581082	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581037	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581042	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581073	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581047	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640562	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581072	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640608	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581036	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581066	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581057	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640583	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581020	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581045	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581060	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640626	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581061	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640606	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640618	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581084	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15141644	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581041	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581025	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640628	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581014	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581058	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640577	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581071	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640630	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581033	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640567	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P15141653	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581023	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581059	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640620	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581034	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581063	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581044	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640607	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581050	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P00581056	-	-
Agilent SurePrint G3 Human Promoter Microarray 1x1M	A_17_P20640563	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0100010529.hg.1	ENST00000385239.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100010529.hg.1	NR_030284.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01022818.hg.1	ENST00000385239.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01022818.hg.1	NR_030284.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01022818.hg.1	TC01001468.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC0100010529.hg.1	ENST00000385239.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100010529.hg.1	NR_030284.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100177526.hg.1	ENST00000385239.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100177526.hg.1	NR_030284.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100177526.hg.1	TC0100010529.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100177526.hg.1	NR_030284.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100177526.hg.1	ENST00000385239.1	Ensembl

Array Name	Probe IDs	Targets	Target Type
HumanHT-12 v4 Expression BeadChip	ILMN_3309269	NR_030284.1	human_transcriptome
HumanHT-12 V4.0 expression beadchip	ILMN_3309269	NR_030284.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 expression beadchip	ILMN_3309269	NR_030284.1	human_transcriptome
Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip	ILMN_3309269	NR_030284.1	human_transcriptome

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Genomic Map