Hs04232438_m1

• Gene Symbol: TTC19
• Gene Name: tetratricopeptide repeat domain 19
• Gene Aliases: 2010204O13Rik, MC3DN2
• Chromosome Location: Chr.17: 15999380 - 16045428 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TTC19
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001271420.1	NP_001258349.1	2 - 3	916		61
GenBank mRNA	AK055780.1	-	2 - 3	472		61

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CB989666.1	-	2 - 3	499		Chr. 17 - 15999824 - 16004244 [+] on Build GRCh38	61
GenBankmRNA	DB479371.1	-	2 - 3	416		Chr. 17 - 15999824 - 16001966 [+] on Build GRCh38	61

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	zinc finger SWIM-type containing 7	ZSWIM7	SWS1	-426.0	Anti-sense	Chr. 17 - 15976560 - 15999692 on NCBI Build GRCh38
Downstream	nuclear receptor corepressor 1	NCOR1	N-CoR, N-CoR1, PPP1R109, TRAC1, hN-CoR	28.1kb	Anti-sense	Chr. 17 - 16030094 - 16216746 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700012196.hg.1

Additional Information:

This assay is in the 5'UTR region of the AK055780.1,NM_001271420.1 transcripts.

• Set Membership: Amplicon length less than or equal to 70, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

cytokinesis
mitochondrial respiratory chain complex III assembly

Function(s)

protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	ENST00000261647.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	ENST00000466729.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	ENST00000470399.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	ENST00000475723.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	ENST00000497842.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	NM_001271420.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	NM_017775.3	Refseq
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	ENST00000261647.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	ENST00000466729.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	ENST00000470399.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	ENST00000475723.5	Ensembl
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	ENST00000497842.6	Ensembl
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	NM_001271420.1	Refseq
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	NM_017775.3	Refseq
Affymetrix Human Clariom D Assay	PSR1700200820.hg.1	TC1700012196.hg.1	Clariom D TC