SNORA77
Genomic Map
Back To TopAssay Details
| Gene Symbol: SNORA77 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_003019.1 | 1 | 56 | 93 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | opticin | OPTC | OPT | -220.6kb | Sense | Chr. 1 - 203494143 - 203508949 on NCBI Build GRCh38 |
| Downstream | long intergenic non-protein coding RNA 260 | LINC00260 |
C1orf217, NCRNA00260 |
872.0 | Sense | Chr. 1 - 203730577 - 203731853 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0100011268.hg.1This assay targets the same location as HTA transcript cluster(s) TC01001689.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k | GT_HS_44k_4047 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800329 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800354 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739069 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739050 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800351 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739051 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800349 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15164772 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800332 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800324 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800365 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800344 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800352 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739080 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739059 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15164774 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800368 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800370 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800343 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800325 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800326 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739077 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739072 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739063 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800335 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739070 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800345 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739067 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15164778 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739056 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15164769 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739062 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739087 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800367 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15164776 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739068 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800328 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800368 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15164778 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739067 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800324 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739069 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15164774 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15164769 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739068 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739070 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800345 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800328 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800351 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739080 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800367 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800365 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739056 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800335 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800329 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739063 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800354 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800370 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739077 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739050 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739072 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800352 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739051 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15164776 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800332 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800349 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739062 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739059 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800325 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800344 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800326 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P20800343 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P00739087 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P15164772 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739070 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739052 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739073 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15164772 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15164774 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739053 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739045 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739080 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739050 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739082 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739091 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739076 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15164777 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739057 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739064 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15164769 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739061 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739067 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P15164781 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739085 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739048 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739074 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739055 | - | - |
| Agilent Human Whole Genome ChIP-on-Chip | A_17_P00739087 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Genome U219 Array | 11763897_at | - | - |
| Affymetrix Human Genome U219 Array | 11763897_PM_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR01026253.hg.1 | TC01001689.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR01026253.hg.1 | ENST00000408716.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR01026253.hg.1 | NR_003019.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100011268.hg.1 | ENST00000408716.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100011268.hg.1 | NR_003019.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100011268.hg.1 | ENST00000408716.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100011268.hg.1 | NR_003019.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100182767.hg.1 | ENST00000408716.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100182767.hg.1 | NR_003019.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100182767.hg.1 | ENST00000408716.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100182767.hg.1 | NR_003019.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100182767.hg.1 | TC0100011268.hg.1 | Clariom D TC |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3243428 | NR_003019.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3243428 | NR_003019.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 expression beadchip | ILMN_3243428 | NR_003019.1 | human_transcriptome |
| Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip | ILMN_3243428 | NR_003019.1 | human_transcriptome |
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