SEPSECS-AS1
Genomic Map
Back To TopAssay Details
| Gene Symbol: SEPSECS-AS1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_037934.1 | 2 | 957 | 76 | ||
| GenBank mRNA | AK095450.1 | - | 2 | 957 | 76 | |
| BX106520.1 | - | 1 | 552 | 76 | ||
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Transcript Location | Amplicon Length | |
|---|---|---|---|---|---|---|---|
| GenBankmRNA | R36081.1 | - | Chr. - - [-] on Build | 76 | |||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase | SEPSECS |
LP, PCH2D, SLA, SLA/LP |
-36.9kb | Anti-sense | Chr. 4 - 25120005 - 25160582 on NCBI Build GRCh38 |
| Downstream | phosphatidylinositol 4-kinase type 2 beta | PI4K2B |
PI4KIIB, PIK42B |
35.5kb | Sense | Chr. 4 - 25234031 - 25279209 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0400012779.hg.1This assay targets the same location as HTA transcript cluster(s) TC04000174.hg.1
Set Membership: |
Amplicon length between 71 and 85
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989476 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142513 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989501 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989451 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989502 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989505 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15553403 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989445 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142472 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142471 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989493 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142476 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989439 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989444 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15553406 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989468 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142459 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142505 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989450 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15553405 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142519 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142530 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989498 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989503 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142495 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989478 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142473 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989469 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142496 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142509 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989446 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989496 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142524 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989462 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142512 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142482 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142462 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989443 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142460 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142488 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989491 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P15553404 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989497 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989471 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989457 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142531 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142461 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989504 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989472 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142520 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142501 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142483 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P23142487 | - | - |
| Agilent Human Whole Genome ChIP Tiling Array | A_17_P02989452 | - | - |
| Agilent Human Genome CGH Microarray 105A (G4412A) | A_16_P36673942 | - | - |
| Agilent Human Genome CGH Microarray 105A (G4412A) | A_16_P00939445 | - | - |
| Agilent Human Genome 244K CGH Microarray (Alpha Test) | A_16_P16622915 | - | - |
| Agilent Human Genome 244K CGH Microarray (Alpha Test) | A_16_P36673942 | - | - |
| Agilent Human Genome 244K CGH Microarray (Alpha Test) | A_16_P00939445 | - | - |
| Agilent Human Genome 244K CGH Microarray (Alpha Test) | A_16_P00939461 | - | - |
| Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522 | 136986 | - | - |
| Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522 | 139703 | BC105081.1 | genbank_mrna_human |
| Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522 | 139703 | BC105083.1 | genbank_mrna_human |
| Agilent SurePrint G3 CGH array (4X180K) CCA_VUMC design AMADID#022522 | 139703 | NM_005987.2 | refseq_mrna_human_NM |
| Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015 | 51924 | - | - |
| Agilent HD CGH Microarray (2X105K) Oxford design AMADID#019015 | 30638 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P16622915 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P36673944 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P16622933 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P16622920 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P36673942 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_18_P23496575 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_18_P23495169 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P16622912 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_18_P23495173 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P00939445 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P16622954 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P00939443 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_18_P23495174 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P00939461 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P36673939 | - | - |
| Agilent Human CGH Whole Genome Microarray 1x1M (G4447A) | A_16_P00939449 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR04002652.hg.1 | TC04000174.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR04002652.hg.1 | ENST00000507794.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR04002652.hg.1 | ENST00000512921.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR04002652.hg.1 | NR_037934.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000562322.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000562322.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000562322.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000567448.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000567448.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000567448.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1600008033.hg.1 | ENST00000567448.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012779.hg.1 | ENST00000507794.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012779.hg.1 | ENST00000507794.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012779.hg.1 | ENST00000507794.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012779.hg.1 | ENST00000507794.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012779.hg.1 | ENST00000510415.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012779.hg.1 | ENST00000510415.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012779.hg.1 | ENST00000510415.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012779.hg.1 | NR_037934.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0400012779.hg.1 | NR_037934.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR04002654.hg.1 | TC04000174.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR04002654.hg.1 | ENST00000507794.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR04002654.hg.1 | NR_037934.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0400187974.hg.1 | ENST00000507794.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400187974.hg.1 | ENST00000510415.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400187974.hg.1 | NR_037934.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0400187974.hg.1 | ENST00000507794.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400187974.hg.1 | ENST00000510415.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400187974.hg.1 | NR_037934.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0400187974.hg.1 | TC0400012779.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0400187976.hg.1 | ENST00000507794.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400187976.hg.1 | NR_037934.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0400187976.hg.1 | ENST00000507794.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0400187976.hg.1 | NR_037934.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0400187976.hg.1 | TC0400012779.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0400012779.hg.1 | ENST00000507794.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0400012779.hg.1 | ENST00000507794.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0400012779.hg.1 | ENST00000507794.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0400012779.hg.1 | ENST00000507794.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0400012779.hg.1 | ENST00000510415.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0400012779.hg.1 | ENST00000510415.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0400012779.hg.1 | ENST00000510415.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0400012779.hg.1 | NR_037934.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0400012779.hg.1 | NR_037934.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000561906.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000562322.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000562322.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000562322.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000567448.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000567448.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000567448.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1600008033.hg.1 | ENST00000567448.1 | Ensembl |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A025357 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A025357 | - | - |
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