Hs04273158_m1

• Gene Symbol: LINC01138
• Gene Name: long intergenic non-protein coding RNA 1138
• Gene Aliases: LINC00875
• Chromosome Location: Chr.1: 148432959 - 148459920 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC01138
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_027468.3		2 - 3	433		110

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	H25599.1	-	2 - 3	247		Chr. 1 - 148435188 - 148459734 [-] on Build GRCh38	110
GenBankmRNA	H44341.1	-	2 - 3	246		Chr. 1 - 148435150 - 148459733 [-] on Build GRCh38	110
GenBankmRNA	R70461.1	-		246		Chr. - - [-] on Build	110
GenBankmRNA	DA678621.1	-	2 - 3	290		Chr. 1 - 148434507 - 148459777 [-] on Build GRCh38	110
GenBankmRNA	BF991203.1	-	1 - 2			Chr. 1 - 148435062 - 148459624 [+] on Build GRCh38	110
GenBankmRNA	DA378654.1	-	2 - 3	326		Chr. 1 - 148435204 - 148459813 [-] on Build GRCh38	110

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	phosphodiesterase 4D interacting protein pseudogene	LOC100132057		-2.6kb	Anti-sense	Chr. 1 - 148402483 - 148432545 on NCBI Build GRCh38
Downstream	peptidylprolyl isomerase A like 4G	PPIAL4G	COAS-2	46.0kb	Sense	Chr. 1 - 148482548 - 148483285 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100018475.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01003080.hg.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR01047786.hg.1	NR_027468.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01047786.hg.1	TC01003080.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01047790.hg.1	ENST00000442423.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01047790.hg.1	NR_027468.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01047790.hg.1	TC01003080.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01047789.hg.1	ENST00000442423.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01047789.hg.1	NR_027468.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01047789.hg.1	TC01003080.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01047785.hg.1	NR_027468.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01047785.hg.1	TC01003080.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0100242766.hg.1	NR_027468.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100242766.hg.1	TC0100018475.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100242766.hg.1	NR_027468.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100242767.hg.1	NR_027468.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100242767.hg.1	TC0100018475.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0100242767.hg.1	NR_027468.3	Refseq