Hs04273773_m1

• Gene Symbol: LINC01235
• Gene Name: long intergenic non-protein coding RNA 1235
• Gene Aliases: -
• Chromosome Location: Chr.9: 13406380 - 13431329 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC01235
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_033863.1		1 - 2	128		90
GenBank mRNA	AK123194.1	-	1 - 2	128		90

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA091500.1	-	1 - 2	128		Chr. 9 - 13408151 - 13431329 [-] on Build GRCh38	90
GenBankmRNA	DA177332.1	-	1 - 2	123		Chr. 9 - 13408184 - 13431324 [-] on Build GRCh38	90

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	multiple PDZ domain crumbs cell polarity complex component	MPDZ	HYC2, MUPP1	-136.7kb	Sense	Chr. 9 - 13105296 - 13279687 on NCBI Build GRCh38
Downstream	long intergenic non-protein coding RNA 583	LINC00583	C9orf146	496.6kb	Anti-sense	Chr. 9 - 13927971 - 13945607 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900009561.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09000915.hg.1

• Set Membership: Amplicon length between 86 and 100, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0900009561.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009561.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009561.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009561.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009561.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009561.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009561.hg.1	ENST00000605459.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009561.hg.1	ENST00000605459.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009561.hg.1	ENST00000605459.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900009561.hg.1	NR_033863.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009561.hg.1	NR_033863.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900009561.hg.1	NR_033863.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09012170.hg.1	TC09000915.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09012170.hg.1	NR_033863.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09012171.hg.1	TC09000915.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR09012171.hg.1	NR_033863.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900165469.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900165469.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900165469.hg.1	ENST00000605459.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900165469.hg.1	NR_033863.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900165469.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900165469.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900165469.hg.1	ENST00000605459.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900165469.hg.1	NR_033863.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900165469.hg.1	TC0900009561.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0900009561.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009561.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009561.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009561.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009561.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009561.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009561.hg.1	ENST00000605459.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009561.hg.1	ENST00000605459.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009561.hg.1	ENST00000605459.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900009561.hg.1	NR_033863.1	Refseq
Affymetrix Human Clariom D Assay	TC0900009561.hg.1	NR_033863.1	Refseq
Affymetrix Human Clariom D Assay	TC0900009561.hg.1	NR_033863.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900165470.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900165470.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900165470.hg.1	NR_033863.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900165470.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900165470.hg.1	ENST00000604724.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900165470.hg.1	NR_033863.1	Refseq
Affymetrix Human Clariom D Assay	PSR0900165470.hg.1	TC0900009561.hg.1	Clariom D TC