Name: [Hs04273871_m1] [SCOC-AS1]
Creator: Thermo Fisher Scientific
Keywords: [SCOC-AS1] Assay, [SCOC antisense RNA 1] Assay

Assay Details

Gene Symbol: SCOC-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_033939.1		4 - 5	480		178
GenBank mRNA	AK095554.1	-	4 - 5	448		178

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA487464.1	-	4 - 5	449		Chr. 4 - 140285155 - 140373360 [-] on Build GRCh38	178
GenBankmRNA	DA070842.1	-	4 - 5	491		Chr. 4 - 140285188 - 140373403 [-] on Build GRCh38	178

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	short coiled-coil protein	SCOC	HRIHFB2072, SCOCO, UNC-69		Anti-sense	Chr. 4 - 140257286 - 140382556 on NCBI Build GRCh38
Downstream	calmegin	CLGN		96.9kb	Sense	Chr. 4 - 140388453 - 140427661 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0400011969.hg.1
This assay targets the same location as HTA transcript cluster(s) TC04001588.hg.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Homo sapiens

Probe spans exons

MicroArray Probes:

Agilent Affymetrix ArrayStar Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Human Genome Microarray 4x44K v2	A_24_P145019	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_24_P281313	-	-
Agilent Genotypic Designed Human Whole genome gene expression profiling microarray 4x44k	GT_44k_24_P145019	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	13237	-	-
Agilent Whole Human Genome Oligo Microarray 4x44K	2845	-	-
Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray	60554	-	-
Agilent Whole Human Genome Microarray 4x44K v2	A_24_P145019	-	-
Whole Human Genome Oligo Microarray G4112A	A_24_P281313	-	-
Agilent Human 1B Microarray G4111A	A_32_P705811	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Gene 1.0 ST Array	8102872	-	-
Affymetrix Human Gene 1.0 ST Array	8102873	-	-
Affymetrix Human Gene 1.0 ST Array	8102874	-	-
Affymetrix Human Gene 1.1 ST Array	8102871	-	-
Affymetrix HT HG-U133+ PM Array Plate	235869_PM_at	-	-
Affymetrix HT HG-U133+ PM Array Plate	1556736_PM_at	-	-
Affymetrix Human Transcriptome Array 2.0	PSR04022125.hg.1	ENST00000512692.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR04022125.hg.1	NR_033939.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR04022125.hg.1	TC04001588.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000609616.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000609616.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000609616.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	ENST00000609616.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	NR_033939.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	NR_033939.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	NR_033939.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	NR_033939.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0400011969.hg.1	NR_033939.1	Refseq
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000608178.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000609616.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000609616.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000609616.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	ENST00000609616.1	Ensembl
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	NR_033939.1	Refseq
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	NR_033939.1	Refseq
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	NR_033939.1	Refseq
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	NR_033939.1	Refseq
Affymetrix Human Clariom D Assay	TC0400011969.hg.1	NR_033939.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400182077.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0400182077.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0400182077.hg.1	NR_033939.1	Refseq
Affymetrix Human Clariom D Assay	PSR0400182077.hg.1	TC0400011969.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0400182077.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0400182077.hg.1	ENST00000512692.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0400182077.hg.1	NR_033939.1	Refseq
Human Genome U133 Plus 2.0 Array	235869_at	-	-
Human Genome U133 Plus 2.0 Array	1556736_PM_at	-	-
Human Genome U133 Plus 2.0 Array	235869_PM_at	-	-
Human Genome U133 Plus 2.0 Array	1556736_at	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1556736_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	235869_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	235869_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1556736_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	235869_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	235869_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	235869_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1556736_at9	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	235869_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	235869_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1556736_at11	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1556736_at1	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1556736_at8	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1556736_at5	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1556736_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	235869_at10	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	235869_at3	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	235869_at7	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1556736_at2	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1556736_at6	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	1556736_at4	-	-
Affymetrix Human Genome U133 Plus 2.0 Array	235869_at4	-	-
Human Genome U95 Set	47380_PM_at	-	-
Human Genome U95 Set	47380_at	-	-
Human Genome U133 Set	235869_at	-	-
Human Genome U133 Set	235869_PM_at	-	-

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Catalog #	4426961
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Array Name	Probe IDs	Targets	Target Type
Illumina human-6 v2.0 expression beadchip	ILMN_1841253	-	-
Illumina Sentrix Human-6 v2 Expression BeadChip	3450438	-	-
Illumina HumanRef-6 v2.0 expression beadchip	ILMN_73263	-	-
Illumina HumanWG-6_V2_0_R2	ILMN_1841253	-	-

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